Helianthus annuus (common sunflower): 110886899
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Entry
110886899 CDS
T05101
Name
(RefSeq) E3 ubiquitin-protein ligase ATL42
KO
K10664
E3 ubiquitin-protein ligase ATL6/9/15/31/42/55 [EC:
2.3.2.27
]
Organism
han
Helianthus annuus (common sunflower)
Brite
KEGG Orthology (KO) [BR:
han00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
han04121
]
110886899
Enzymes [BR:
han01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
110886899
Ubiquitin system [BR:
han04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
ATL proteins
110886899
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-rbx1
zf-C3HC4
zf-ANAPC11
zf-RING_UBOX
zf-RING_16
zf-C3HC4_3
zf-RING_5
zf-RING-like
MARVEL
zf-C3H2C3
zinc_ribbon_16
DUF7560
Motif
Other DBs
NCBI-GeneID:
110886899
NCBI-ProteinID:
XP_021990468
LinkDB
All DBs
Position
10:complement(179138045..179139550)
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AA seq
442 aa
AA seq
DB search
MTFPACNLPEFLQIPVTQQKKLIIIIISIIIISSSNPTKSQSLTASPSEDDISNSPDSDS
TSFQPSLAVVIGVLAVMFSLTFLLLVYAKWCHRPSSPQYLNQETLGGLTRSVSRVSGIDK
TVIESLPFFRFSTLKGWRNGLECSICLSRFEDVEVLRLLPKCKHAFHIDCVDQWLEKHSG
CPLCRCKVSEEDVTLFAYSSSFRFLNNQSAAHEGSNLELFVEREGSARFGSKRSVHKMEK
KNIDHEEILEDEGMLHKFNHRIVISDIEHDLMGKNRWSSLSSSDLLFLKSEMITSLSSNL
FHNDQDQTNVASMSSKTCVNNKNHDHDLDLDHQVIKIKEEIKRKREFEKKIKKFPSEVPG
IEFSNESKSAKVVEKRSMSEIIVHPRFLGVEESSNKEASLGEMSAKEERLKRLWLPIARR
TLQWFANRDEQQQQQINTRSQV
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atgacctttccggcgtgcaacctgccggaatttcttcaaattccggtgacccaacaaaag
aaacttattattatcataatatctatcatcatcatcagctcatctaatccaacaaaatca
caatctttaaccgcttctccgtccgaagatgatatttcaaactcaccggattccgacagt
actagtttccaaccaagtttagcagttgtcattggagttcttgctgtcatgttttctcta
acattcttgcttttggtttatgcaaaatggtgtcatagaccatcttctcctcagtacttg
aatcaagaaaccttaggtgggttaactagatcagtttctagggtttctggtattgacaaa
acagtgattgaatcacttccattcttccggttttcaacgttaaaagggtggcgaaacggc
ttggaatgttctatttgtttgtcaagatttgaagatgttgaggttcttagactgttgcct
aaatgcaaacacgcttttcatatcgattgtgtcgatcagtggctcgaaaaacactcgggt
tgtccactttgtaggtgtaaagtaagcgaagaggacgtaacccttttcgcgtattcgagt
agttttaggtttttaaacaatcaatcagctgcccatgaaggttcaaacttggagttgttt
gtggaaagagaaggatctgcaaggtttggaagtaaaagaagtgttcacaagatggaaaag
aagaatattgatcatgaagaaatcttggaagatgaaggaatgttgcataagtttaatcat
aggattgtgatatctgatattgagcatgatttgatggggaagaatagatggagtagtttg
agctcttctgatcttttgtttttgaaatctgagatgattacttctttgtcaagtaacctt
tttcataatgatcaagatcaaactaatgttgcttctatgtcaagcaaaacatgtgtaaac
aataagaaccatgaccatgatcttgatcttgatcatcaagtaatcaagatcaaggaagaa
atcaaaagaaaaagggaatttgagaaaaaaatcaagaaattccctagcgaagtgcccggt
atcgaattttccaatgaatcaaaatctgctaaggttgtcgagaagcgatcgatgtcggaa
atcattgttcatccaaggtttcttggtgttgaagaatcaagtaataaggaagctagttta
ggtgagatgagtgctaaagaagagagattaaagagattatggctacctattgctagaaga
acacttcaatggtttgctaatagagatgaacaacaacaacaacaaattaacacaagatca
caagtttaa
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