Helianthus annuus (common sunflower): 110889037
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Entry
110889037 CDS
T05101
Name
(RefSeq) cell division control protein 48 homolog C
KO
K14571
ribosome biogenesis ATPase
Organism
han
Helianthus annuus (common sunflower)
Pathway
han03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
han00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
110889037
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
han03009
]
110889037
Ribosome biogenesis [BR:
han03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
110889037
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
RuvB_N
AAA_5
AAA_16
AAA_2
AAA_14
AAA_22
nSTAND3
AAA_33
RNA_helicase
TIP49
Rad17
IstB_IS21
AAA_28
AAA_17
Mg_chelatase
AAA_18
AAA_3
ATPase
Viral_helicase1
NACHT
Sigma54_activ_2
AAA_19
NB-ARC
TsaE
Zeta_toxin
ATPase_2
Sigma54_activat
Parvo_NS1
ABC_tran
Bac_DnaA
DUF5906
AAA_7
AAA_11
Cytidylate_kin2
MCM
Motif
Other DBs
NCBI-GeneID:
110889037
NCBI-ProteinID:
XP_021992219
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All DBs
Position
11:2137858..2141941
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AA seq
674 aa
AA seq
DB search
MVKQTLDVHNNNDKKRKLTANYEEDDDVMSQSSASKKAKKIEIKGRGIELQTEPSELESS
STHTVLSFENESQQFEPGFDFTKSMLRNKYSGSTIRKNIELEPMVKAGSRKSNNNGPRFD
DIGGMDDVLDQLEMEVIVPLLRPDLYPSLGLRATAGVLLHGPPGCGKTLLARAIANESGA
SFYKISAPELVSGVSGESEENIRELFSKANRTAPSIVFIDEIDAIASKRENLQREMEKRI
VTQLMTCMDESHRTSEPDDTLETTEMPNGKPGYVLVIGATNRPDALDPALRRPGRFDLEI
SLGPPNEDTRYKILSVLTRDKKLEGDFDLMKIARSTPGFVGVDLDRLVNTAGGLAIRRVF
YKRKLELPTESTNAIQNKNWLKKPWTHEEHASYRITTSDFEAAAKLVQPSSKREGFTSIP
NVKWEDIGGLHSLRREFYTHIISRIKYPDECEDIKDDLETGFLLYGPPGCGKTLIAQAVA
NEAGANFIHIKGPELLNKYVGESELALRTHFSRARTCSPCILFFDEVDAITTKRETDGNW
VATRVVHQFLTELDGGDQRKGVYVIGATNKPDAVDSALLRPGRFGENMYVPLPNQDERVL
ILKALSKNRRLDADVDLIAIAQRCANFSGADLSKLMKKASLAAHEERISKIIAAGHEGTS
LGDTRHIIKRKLPF
NT seq
2025 nt
NT seq
+upstream
nt +downstream
nt
atggtgaaacaaacactagatgttcataacaacaacgacaagaagcggaaattaactgct
aactatgaagaagacgatgacgttatgtcacagtcttcagcaagcaaaaaagcgaagaaa
attgaaattaagggtagaggaattgagctacaaacagaaccatcagaactggaatcgagt
agtacacatacggttttgtctttcgagaatgagagccagcaattcgagccggggtttgat
tttactaaatcaatgctgcgaaacaaatacagcgggtcaacaatacgtaaaaatatagag
ttagagcccatggtaaaagccgggtcaaggaaatcgaataacaacgggccaaggtttgat
gacattggtggtatggatgatgtgttggatcagctggaaatggaggtgattgttcctttg
cttcgtccggatctttatccaagcctcgggctaagagcgacggctggtgttttgttacat
gggccgcctgggtgtggaaagacgctactagctcgtgccattgctaatgagtccggggct
tcgttttataagatttcggcccctgagttggtctccggtgtatcaggtgaatctgaagag
aatataagagagctattttcaaaagcaaacaggactgcaccatctatagttttcattgac
gagattgatgcaattgcttcaaaaagagaaaaccttcaaagggagatggaaaaaagaatc
gtgacacaactaatgacgtgtatggatgaatctcataggacatctgaaccagatgacact
ttagaaaccacagaaatgccaaatggcaaaccgggatatgttttggtgattggtgctacc
aatagacctgatgcgctcgacccagcgttaagaagaccaggacgttttgatttggaaatc
agtttaggtcctccaaatgaagatacaagatacaagattctttctgtgcttacacgagat
aaaaaacttgaaggtgattttgacctgatgaaaattgcgaggtcaactcctggttttgtt
ggagtcgatttagatcgtttggtgaacacagctggtggccttgctataaggagagtgttt
tataaaagaaagttggaacttcctacagaaagtacaaacgccatacaaaataaaaactgg
ttgaagaagccatggactcatgaagagcatgccagctataggatcacaacgtctgatttt
gaggcagctgccaagctggttcaaccctcttctaaaagagaagggttcacgagcattcca
aatgtcaaatgggaagacattggaggtcttcattcgcttagaagggagttttacactcac
attatcagccgtataaaatatcctgatgagtgtgaggatatcaaagatgatttggagacg
gggtttttgctttatggacctcctggttgtggaaaaacattgattgcccaagctgttgct
aacgaagcaggagcaaattttatacacattaagggccctgagcttctgaacaaatacgtc
ggcgagagtgaattggcattgcggactcatttcagtcgcgcaaggacatgttctccatgc
atattattctttgatgaggtagatgctattacaactaagcgtgaaactgacgggaattgg
gttgccactcgagttgtacaccagttcttgacagagctagatggtggtgatcaacgtaag
ggagtttacgtaattggtgctaccaacaaaccagatgcggtagactcagcactcttacgg
cccggaaggtttggggaaaacatgtatgtccctctgccaaaccaagacgagcgtgtgttg
atcttaaaagctctttctaagaataggcgattagatgctgatgtggacttgattgctatt
gctcagagatgtgcaaatttcagtggagcagatctttcaaaactgatgaagaaagcttca
ttggctgctcatgaagaaagaattagtaaaattatagctgccggtcatgaagggacatct
ctaggtgacacccgacatattattaagagaaaattaccattttag
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