KEGG   Helianthus annuus (common sunflower): 110889075
Entry
110889075         CDS       T05101                                 
Name
(RefSeq) DNA-directed RNA polymerases IV and V subunit 2
  KO
K16252  DNA-directed RNA polymerase IV and V subunit 2 [EC:2.7.7.6]
Organism
han  Helianthus annuus (common sunflower)
Pathway
han03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:han00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    110889075
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:han03021]
    110889075
Enzymes [BR:han01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     110889075
Transcription machinery [BR:han03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol IV and V specific subunits
     110889075
SSDB
Motif
Pfam: RNA_pol_Rpb2_6 RNA_pol_Rpb2_1 RNA_pol_Rpb2_7 RNA_pol_Rpb2_4 RNA_pol_Rpb2_3 RNA_pol_Rpb2_2 RNA_pol_Rpb2_5
Other DBs
NCBI-GeneID: 110889075
NCBI-ProteinID: XP_021992265
LinkDB
Position
11:complement(1049662..1059320)
AA seq 1199 aa
MEEAGPSNKEKPSNGAVHLDLNDDDEDDDEMMDAPSVRDFDELTLKNFTKRASASFFKHY
GLISHQINSFNDFIKVGIQNVFDSIGEIVVEPGYDPSKKGDEWRFASVKFGKVTLEHPRF
WTGEKFTADSGKEYLEFLPRHARLQNMTYSSRMKVQFTKVVYTQELVRSDKFKTGKEKFL
DKKILDTEEREVYIGRIPVMVKSDSCWMSGADKDDCDYDQGGYFIIKGAEKTFIAQEQLG
FDRIWVSGTPNWRVTYRSVHKRKRVYVKLTDTPKIEDIVGGAQVITVYVLSLMDMPIWIL
FFALGVSSDKQVVDLIDADITDGNIVNILIASIHAADQECDEFRKGRNALNYVEKLLKES
RFPPKESVKECIENYLFPNIVGFSRKARYLGYMVKCLLEGYVGRRKTCNKDDFRNKRLEL
AGELLERELKIHLKHAEKRMVKSMQRDLYPDRTVQPIEHYFDAAIITNGLSRAFSTGSWS
HPLKNMEKTSGVVATLRRANPLQMIADMRRTRQQVLYAGKAGDARYPHPSHWGKICYLST
PDGENCGLVKNLAGTALVSTTVREQFSDILTACGMEKLVDDTSTSLSGMDRIFVNGDWVG
NCKNSASFVAEFRSKRRSKQVPPQVEIKRDANHKEVRIFSDAGRILRPLLVVKNLHKIKL
LKGGGYSFQDLLDNGVVELIGPEEEEDCCTAWDIKYLFLENDDHNPGKYTHCELDMSFML
GLSCGIIPFANHDHAKRVLFQSQKHSQQAIGYSSTNPDIRMDTLSHQLFYPQRPLFKTVL
SDCLEKSQPLGQTQKGMIPRPEFYNGQCAIVAVNVHLGYNQEDSLVMNRASLDRGMFRSE
HIRSYKEEVDNKEALGKKVKSDDAINFGKIQSKIGRVDSLDDDGFPFIGANLQSGDIVIG
KFTEGGSDHSVKLKHTERGMVQKVVLSANDEGQNFAVVSLRQVRSPCLGDKFSSMHGQKG
VLGYLEAQENFPFTVQGIVPDIVINPHAFPSRQTPGQMLESALGKGIALGGSQRYATPFS
SPSVDAITAQLHRAGFSRWGNERLYDGRTGDMVKSLVFIGPTFYQRLVHMSEDKVKFRNT
GPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGASANLHERLFTLSDCSEMHVCRRCKR
MASVIQRSVPGGHKIRGPYCRICDSVEDVIKVSVPYGAKLLSQELFSMGISLKFDTELC
NT seq 3600 nt   +upstreamnt  +downstreamnt
atggaagaggcaggaccgagcaacaaggagaagccatcaaacggagcggtacatctcgac
ttaaacgacgatgatgaagacgacgatgaaatgatggatgcaccatccgttagagatttc
gacgaactgacgttaaagaactttactaaaagggcatcagcgtcctttttcaaacactac
gggcttataagtcatcagatcaactcgtttaacgacttcatcaaagtaggaattcagaat
gttttcgattctattggtgagattgttgttgaaccagggtatgatccctcaaagaaaggt
gatgaatggagattcgcttcggtgaaattcgggaaggtcactctcgagcaccctcggttt
tggacgggtgaaaagtttacagctgatagcggtaaagaataccttgagttcttgcccaga
catgcgcgtcttcaaaatatgacatactcatcccgaatgaaagttcagttcacaaaagtg
gtgtatactcaagagcttgttagaagtgacaagttcaaaactggaaaagagaagtttttg
gacaagaaaatcttagataccgaggagcgagaagtgtatatcgggaggattcccgtgatg
gttaaatccgactcgtgctggatgagcggagccgacaaagacgattgtgattatgaccaa
ggtggctatttcataatcaaaggagccgagaagactttcattgcacaagagcagctcggg
ttcgatagaatttgggtgtcaggtactccaaattggcgagtgacataccgttcggttcac
aagagaaaaagggtttacgtaaaactgacagacactccgaaaatcgaagatattgtaggt
ggagcacaagtgataacggtatacgtgttaagtttgatggatatgcctatatggatcctc
tttttcgcccttggggtatcgtcagataaacaagtggttgacctgatcgatgccgatatt
acggacggaaatatcgtgaatattttaattgcttcgattcacgccgctgatcaggaatgc
gatgagtttcgtaaaggaagaaacgcgctaaattatgttgaaaaacttctcaaagaaagc
agatttccaccgaaagagtcggtcaaagagtgtatcgagaactacttatttccgaatatc
gtcggctttagtagaaaagctcggtatcttgggtatatggtgaaatgtcttctagaaggt
tatgtcggtcgaagaaaaacttgcaataaagatgattttaggaacaaacggttggaactg
gctggcgagttgcttgaacgagagcttaaaattcatcttaaacatgcggagaagcgaatg
gtgaagtcgatgcaaagggatctttatccggatcgaactgtacaaccgatagagcattat
ttcgacgctgcaattattacaaatgggctttcgcgggctttttcgacgggttcgtggtca
catccgttgaaaaacatggagaagacgtctggtgtggtggctacacttagaagggcaaat
cctttgcaaatgatcgctgatatgcggagaacccgtcagcaggttttatatgccggcaag
gctggagatgcaagatacccacacccatctcactggggaaagatatgctatctttccacc
cctgacggtgaaaattgcgggttggtaaagaatctggctgggactgctcttgtgtcaacg
acagtccgggaacaattttctgatatactgacagcgtgtggaatggaaaagttggtggat
gatacctcaacttcactctccggaatggaccgaatttttgtgaacggtgattgggtcggg
aattgcaaaaattctgcttcgtttgtagctgagttcaggagcaagcgccgtagtaaacaa
gttcctcctcaggttgaaataaaaagagatgcgaatcataaagaagtgaggatattttcc
gatgctggaagaattttgcgtccccttttagtcgtcaaaaacttgcacaaaatcaaactt
ttaaagggcggaggttactctttccaagatcttctagataacggagtcgttgaactaatc
ggacccgaagaggaagaagattgctgcacagcatgggacatcaaatatctttttctcgaa
aatgacgatcataaccctggaaaatacacacattgtgaactcgacatgtcgtttatgtta
ggtttaagctgcggcattatcccctttgctaatcacgatcatgcgaaaagggtcctgttt
caatcacaaaaacacagtcagcaagcgatcgggtactcaagcacaaatcccgatatccga
atggacacactctctcatcagttattctaccctcaaaggcctcttttcaaaaccgtgctt
tctgattgtctcgaaaaaagtcaacctcttggtcaaactcaaaagggtatgatcccgaga
cctgaattctacaacggccagtgtgccatcgtggcggttaatgtgcatctcgggtacaac
caagaggactcgttggttatgaaccgcgcgtctttagaccgcgggatgtttcggtcggaa
catattagaagttacaaggaagaagtggataataaggaagcgttagggaagaaggttaag
tcggatgacgctatcaacttcgggaagatacaaagcaagattggacgggttgatagtctg
gacgatgacgggttcccgtttatcggtgctaatttgcagagcggtgatatagtgatcggg
aagtttacagaagggggatccgatcatagtgtgaaattgaagcacaccgaaagagggatg
gttcaaaaggtcgtgctttcggcaaatgatgaaggacagaactttgcggtggtatctctt
agacaggtccgttcgccatgtcttggtgacaagttttcgagtatgcatgggcaaaagggt
gttttgggttatctggaagctcaagaaaattttccgttcacggtacaaggaatcgttcct
gatattgtaataaacccgcacgctttcccttcaagacaaactcccgggcagatgctggaa
tctgccctgggtaaggggattgcgttgggcggttcacaacgatacgctaccccgttttct
tctccctctgtggatgccataaccgctcagcttcacagggccgggttttcgagatgggga
aacgagaggctatacgacggacgaaccggtgatatggtgaaatctcttgtcttcatagga
ccgacattttaccagaggctggtccacatgtccgaagacaaagtgaagtttcgaaacacg
ggccctgtacaccctctcactcgacaaccagtggcagacaggaaacggttcggtgggatc
aagttcggtgagatggagcgggactgcctcatagcccatggagcctcggctaaccttcac
gagcgtcttttcactctgagtgactgttcggagatgcatgtttgcagaaggtgcaagaga
atggcaagtgtgatccagaggtcggttccggggggacataagatacgcgggccgtattgt
cggatttgtgattctgtggaggatgtgatcaaggtaagcgtgccgtatggcgcaaagtta
ttgtctcaagagctcttcagtatggggatctctcttaagtttgacactgaactatgctag

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