Helianthus annuus (common sunflower): 110889495
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Entry
110889495 CDS
T05101
Name
(RefSeq) sister chromatid cohesion protein PDS5 homolog A isoform X1
KO
K11267
sister chromatid cohesion protein PDS5
Organism
han
Helianthus annuus (common sunflower)
Brite
KEGG Orthology (KO) [BR:
han00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
han03036
]
110889495
03400 DNA repair and recombination proteins [BR:
han03400
]
110889495
Chromosome and associated proteins [BR:
han03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Other sister chromatid cohesion factors
110889495
DNA repair and recombination proteins [BR:
han03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Shu complex and associated proteins
110889495
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDS5
Cnd1
HEAT_EF3_N
HEAT_GCN1
TOR1L1_N
TPR_DNAAF5
HEAT_GCN1_C
HEAT_EZ
HEAT_2
TPR_IPO5
Motif
Other DBs
NCBI-GeneID:
110889495
NCBI-ProteinID:
XP_021992719
LinkDB
All DBs
Position
11:complement(9405188..9418318)
Genome browser
AA seq
1164 aa
AA seq
DB search
MADSDGKAAKDLIRDVGKQLSAKKECPHKDLLVKLLRQAASALPKLKTQSDLLKPNIKPL
SDSILKHGLLKQKDKDVRLLVSICVCEILRILAPNPGFSDADLRSIYQLLLGMFGELVDT
KSPYYSRRVELLETVSKYNFCVLMLDIGCEDLVLKMFNIFFGVIRKEHSSNVFGAMSSIM
SAILKEKVSQALMEVILRNLLKDKKDASPASFQLAVSVIDDCSQTLEPFVCRFLNRCILD
RDNVNSELKESYHDIIYEIIQCAPQMLVAVVENLSQELLTEQVDVRITAIKFVGKLFSIP
GCHIAQEYHHLFAEFINRFADKSSAVRLNAVLCAKSFYLFNPPGDNSTTVLSALEGRLLD
FDDKVRTQAVAVVCDLAKSNLRPVPPEMITQAAKRLRDKKTSVRKKALQMLLDVYHDYCV
KCSEGIIKLSVDFEQIPCGILLLCYDKDVEFGVQNIEHVLEEDLFPVSLSVEERIRHWIF
LFSHSVSAYKDGMFTAAHEKALTAVLCQKKRLQLEMQSYLDLRTKEKQNVSERGEEKIKK
LFAKMSTCFPVKVKAEECFNKLHLVKDVGLFNTFKEILNEPEFGSSQIIRDNFVKKIKDL
HTDFEFLQLLATKCSFNLFSSDHVRCILDNLSENKFGQANLKKACVALLMIIVNAFPLLL
RGSEEPFCTLLLEEKSPFCNELLQMLVKAGPHISVDLSVIYPFLERICLNGTRAQAKLAI
SAISELIVTSQQFTFSYLCKTLVDALESGQHTPAVLQSLGCMAQHSVSAFESHAEEITRY
IFDNIFSGLESDSSASCKLKIFGLKTLVKSFLPHQRTGVTRQIDEVLGIVSQMLLRAEIS
KGTLSCKKDKDHLRLAAATSVLQLSQLWDSHIPADIYRETVLMAKDHSTLVRKSFIKKTF
KLLKNNFLHCKYLCAFALAASDTFDGSPKDDSLNYMAEIIKIRHLEAKVKRDATDNPVCS
MIFLIHILAHDTKFPSQDPENEENSGPFFSPLVFTMDTLLNPSFVDGDMNRIHTVVSELH
NIFNAIKMAEDALDVAKTSRLHVLANFGSKYLVTKNSGRPVSHTPTNILLPALLYKKGNA
KQRERARSTKSSRKSLDDNAFDDGQLHKRSKTLNAHKKNSHETQKQTVSGDKEKQDFISP
ESITCLAEKPSSQEDSSSGDWALG
NT seq
3495 nt
NT seq
+upstream
nt +downstream
nt
atggcggattccgacggtaaagctgcaaaagacctaattcgcgacgtcggcaaacaactc
tctgcgaagaaggaatgtcctcacaaagacctccttgttaagctactccgtcaagcggca
agtgcactgccaaagttaaaaacacaatcagatttgctaaagcctaatataaagcccttg
agcgattctatattgaagcatggcttgctgaagcaaaaggacaaagatgtgcgacttttg
gtttccatatgtgtttgtgaaatacttaggatccttgctccaaatcctggctttagtgat
gcagatctcaggagcatatatcaactcttattgggtatgttcggggagctcgttgacacc
aaaagtccatattactcaaggagggtagagctattggagactgtttcaaaatacaatttc
tgtgtgttaatgttagatataggatgtgaagatttagttctgaagatgttcaatatattt
tttggtgtgataaggaaagagcattcttcaaatgtatttggtgcaatgtcatcgataatg
tcagctattctaaaggagaaagtttctcaagcacttatggaagtaattttgcgtaatctt
ttgaaggacaaaaaggacgcatctccagcttcttttcagctagctgtttctgttattgat
gattgcagtcagactcttgaaccgtttgtttgtcgttttctcaaccgttgtattttggat
cgagacaatgttaatagtgagctcaaagaatcgtatcatgatatcatatacgaaatcatt
cagtgtgctccacaaatgcttgttgctgtagtagaaaacttatctcaggaactactgact
gaacaggttgatgttcggataacggctatcaagtttgttggaaaacttttttcaattccc
ggatgtcacattgcgcaagagtaccaccatctattcgcagagtttataaatagattcgct
gataagtctagtgcagttagacttaatgctgtattatgtgctaaatctttttacttattt
aatccaccaggcgacaattccactacagttctgtctgcccttgaaggtcgccttttagac
ttcgacgataaagtgagaacacaagcagttgcagtggtgtgtgatcttgcaaagtcgaat
ctcagacctgtaccacctgaaatgataactcaagctgctaaaagattacgtgataaaaag
acatctgttagaaagaaagcgttgcaaatgctactagacgtctatcatgattattgtgtt
aaatgttctgaaggcatcatcaaattaagtgttgactttgaacaaataccttgtggtatt
ctgttactttgctatgacaaggatgtggagtttggcgttcagaacatagaacatgtgctt
gaagaggatttgtttcccgtttcactttcagttgaggagaggattaggcactggatattt
ttgttttcacattcggtttccgcttacaaggatggcatgtttaccgctgctcatgagaag
gcactgactgctgttttgtgtcagaaaaaaaggttgcaacttgagatgcagagttaccta
gatctccggacaaaagaaaagcagaatgtctctgaaagaggcgaagaaaaaatcaaaaag
ttgtttgcaaaaatgtcaacatgcttccctgtaaaagtcaaagcagaagagtgctttaat
aagttacatttggtgaaagatgttggcctttttaacaccttcaaagagattttgaatgaa
ccggagtttggaagttcacagatcatcagagataattttgtcaagaagatcaaggacctg
cacacagattttgaatttctacaattactcgcgacaaaatgttcatttaatttattcagt
tctgatcacgtgaggtgtatacttgataatctctccgaaaacaaatttggacaggccaat
ttaaagaaggcttgtgtggcacttcttatgattattgttaatgctttcccgctacttctg
agaggttctgaagagccattctgcacactgttgttagaagagaaatcaccattctgtaat
gagctgcttcaaatgttggtaaaagctggacctcatatttctgttgacctcagtgttatc
taccctttcttagagaggatctgtctgaacggaactcgtgctcaggccaagcttgcaatc
tccgccatcagtgaattaattgttacttctcagcagttcactttctcttacctgtgcaag
acactcgtcgatgctcttgaaagtgggcagcatacccctgcagttttgcaatctttgggt
tgcatggctcagcattctgtatctgcgtttgaatcccatgctgaagagatcacacgttat
atatttgacaacatcttttccggtctagaatctgactccagtgcttcttgcaaattgaag
atatttgggcttaaaacactcgtcaaaagctttttgccacatcagcgtacaggtgttact
cgtcaaattgatgaagtacttggcattgtatcacaaatgcttctaagggctgagatttct
aaaggcacactctcctgtaaaaaggacaaagatcatctaagattagccgcagctacatcc
gttcttcagctttcccaattatgggactcacatattcccgcggatatttaccgtgaaaca
gtcttgatggccaaggaccattctactctggtacggaaatcgttcatcaagaaaacattt
aagcttttaaagaataacttccttcattgtaaatatctctgtgcttttgcattggctgct
tctgatacgttcgatggttcaccaaaagatgattcgctaaattatatggcagaaattata
aagatccgtcacttagaagctaaagtgaagcgtgatgcaacagataatcctgtatgttca
atgatatttttaatccacattcttgcccatgataccaagtttccgtcacaagatcccgaa
aacgaagagaattctggtccctttttcagcccgcttgtttttactatggatacactactc
aatccgtcttttgtagatggtgatatgaatcgaatccatacagttgtttctgaattgcat
aatatatttaatgctatcaagatggccgaggatgcacttgatgttgcgaaaacctctagg
ctgcatgttctagctaactttggatccaagtatcttgttactaaaaatagcggaaggcct
gtgtcacacactccgaccaatatcttactgcctgcattactttataaaaaaggcaatgcc
aaacaaagagaacgtgctagaagtactaagagttcgcgcaaaagtttagacgataatgca
ttcgatgatggtcaattgcacaaaagaagcaagactctgaatgcacacaaaaaaaactcg
catgaaactcaaaagcagaccgtatctggtgacaaagagaagcaggactttatttctcca
gaatcaattacatgccttgcagaaaagccttcatctcaggaggattcttcaagtggtgac
tgggctttgggataa
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