Helianthus annuus (common sunflower): 110889864
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Entry
110889864 CDS
T05101
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 14
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
han
Helianthus annuus (common sunflower)
Pathway
han03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
han00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110889864
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
han03041
]
110889864
03009 Ribosome biogenesis [BR:
han03009
]
110889864
Enzymes [BR:
han01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
110889864
Spliceosome [BR:
han03041
]
Complex A
U1 snRNP components
U1 related factors
110889864
Complex B
110889864
Ribosome biogenesis [BR:
han03009
]
Eukaryotic type
Pre-60S particles
Helicases
110889864
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
WW
ERCC3_RAD25_C
RSB_motif
Motif
Other DBs
NCBI-GeneID:
110889864
NCBI-ProteinID:
XP_021993130
LinkDB
All DBs
Position
5:complement(123681305..123686413)
Genome browser
AA seq
997 aa
AA seq
DB search
MSAEGASDSSAPRYAPPDPTLPEPWKGLIDGSSGVMYYWNPETNITQYEKPAAVPPPVPS
GPPSVPSASKPVSAPGTRVEQPNGIPGQQTHQMFTTPEQQMPPQQGNSIPQSYQGVGMEQ
PQSYQYTHQQPMPYMGYQQRPPNMMQPPQHLQQYPPQQDHRAAFTQREDAPPVQSQPSDV
NPIQPPPTQYGGPQFNMQQPSSFGQLQPSGVDYQQHGPQFQNQMGQQPNIPSVGSKMGFE
DNPPGRGGNDHYFNAKNGGPGTAPHQPKLAAIPVARTQMNVTPTIPGGPVSHNMYGQATG
GPPFMNNAMMRPNPAVMVSPDAMNLSSVDMYRQKHDVTATGDNVPAPFMSFESTGFPPEL
LREIYAAGFAFPTPIQAQTWPIALQNRDIVAIAKTGSGKTLGYLIPAFMLLRHCNNNPQN
GPTVVVLAPTRELATQIQDEAIKFGRSVRISCTCLYGGAPKGPQLKELERGADIVVATPG
RLNDILEMRKVDFRQVSLLVLDEADRMLDMGFEPQIRKIVNEIPPRRQTLMYTATWPKEV
RKIAGDLLVNPVQVNIGNADELAANKSITQYVEVVPQMEKQRRVEQILRSEERGSKIIIF
CSTKKLCDQLTRSISRTFGAAAIHGDKSQGERDFVLNQFRSGKSPILVATDVAARGLDVK
DVRVVINYDFPNGVEDYVHRIGRTGRAGAKGVAYTFFSEQDWKHAPDLIKVLEGANQPVP
HVVREIATRGGPGFGKDRGGMSRFDSGGGGQFDSGGGRGAMRDGGFRGRGFDSRDGGFGG
RGGPGRGDMRDGRFGGGGDLRDGGFGGRGGGFGGRGGQRDGGFGGHGGMRDGGRGGGFGG
RGGGREGNFGGRGGGRDGNFGGRGGGRDGNFGGRGGPRGVGFGGPDGGWDRNDRFKDSRG
GRGRGRFDNRRDGDRSRGRSYSRSRSRSRSRSRSWSRSRSRSRSRSRTPVRRERRRESKF
DQKEAEVPVVGLNSEAMGMQPDVRPESSVGVNQIAEP
NT seq
2994 nt
NT seq
+upstream
nt +downstream
nt
atgtctgctgagggagcctctgattcttcggctcctcgttatgccccgcctgatccaact
ttgcctgaaccctggaagggtttaattgatgggagctcaggtgtgatgtactattggaac
cctgaaactaatatcactcagtatgagaaacctgctgctgtgccgccaccggtgccatca
ggcccaccttctgtgccatctgcatctaaacccgtgtctgcaccgggtactagggtcgaa
cagccaaatgggattcctggtcaacaaacacaccagatgtttacgacaccagaacaacaa
atgccacctcagcaaggtaatagcatacctcaatcataccagggtgttggtatggaacaa
ccgcagagctaccagtatacacatcagcaaccgatgccctacatggggtatcaacagagg
ccacctaatatgatgcagccacctcagcatctacagcaatatccccctcaacaagatcac
agggctgcattcacgcagagagaggatgctccgcccgttcaaagtcaaccttcagatgtt
aatcccattcaaccaccaccgacgcaatatggtggcccgcagtttaacatgcaacaacca
tcttcatttggtcaattgcagccgagtggtgttgattatcagcaacatggaccacagttc
cagaaccaaatgggtcagcagccaaacattccgtcagtaggatcaaaaatgggcttcgag
gataatccacctggaagaggcgggaatgatcactattttaatgctaaaaatggtgggcct
ggtacggcccctcatcaacctaagcttgcagcaattccagtggcaagaactcagatgaat
gttacacctaccatccctggtgggcccgtctcacataacatgtacgggcaagctactggt
ggccctccgtttatgaataatgctatgatgaggccaaatccagcagttatggtttctcca
gatgctatgaacttgtcatctgttgacatgtatcgtcaaaaacatgacgtaacagcaacg
ggtgataatgttcctgctccattcatgtcatttgaatccactggattccctccagaattg
ttgagggagatttatgctgctggttttgctttccctactccaattcaggcacaaacgtgg
cctattgctctacaaaacagggacatagtggcaattgcaaagacaggttctggtaaaaca
ttaggttatctgatccctgctttcatgctgcttagacattgtaacaacaatccccaaaat
gggcccacggttgttgttttagctcccactagagaacttgctactcaaatacaagacgag
gccatcaagttcggtcgatctgtcagaatatcttgcacatgtttgtatggcggggctcct
aagggcccacaactgaaggagttagaacgaggagcagatattgttgtagcaactccaggt
cgactaaatgatatacttgaaatgaggaaggttgactttcgtcaagtttctcttcttgtg
cttgatgaggctgataggatgcttgatatgggtttcgaacctcaaataaggaagattgtc
aatgaaatacctcctcgcaggcagaccttaatgtatactgccacttggccgaaagaagtg
aggaaaatagctggtgatcttttggtcaatcctgttcaggtcaacattggcaatgcagat
gagcttgctgcaaacaagtctattacacagtatgtggaagtggtccctcaaatggagaag
cagaggcgtgtggagcagattctgagatctgaagaaaggggttccaaaattattattttc
tgttcaactaaaaagctatgtgatcagcttacacgtagtattagtcgtactttcggtgct
gctgccattcatggagacaaatctcagggtgagagagacttcgttctcaatcagttccgt
tctggaaagtcccccattttagttgctactgatgttgctgcacgtggccttgacgtcaag
gacgtaagggtggtgattaattatgatttcccgaacggtgtggaggactatgtccaccga
atagggcgaacaggaagggcaggggcaaaaggggtggcttacactttcttttctgaacag
gattggaagcacgctcctgatcttatcaaagttcttgagggggccaatcagcctgtgcca
catgtggtgcgagagattgcgacacgtggcgggcctggtttcggtaaggaccggggtgga
atgagtcgctttgattctggagggggtggacaatttgattctggtggtggtcgtggagcc
atgagggatggtggttttaggggccgtggttttgactcaagggatgggggttttggtggc
cgtggtggtcctggtagaggtgacatgcgggatggcagatttggtggcggtggtgacttg
agggacggtggttttggtggccgtggtggtggctttggaggcagaggtggccagagggat
ggcgggtttggaggtcatggtggaatgagagacggcggtcgtggcgggggatttggtggt
cgtggtggagggagagaaggcaactttggtggtcgtggtggagggagggacggcaacttt
ggaggccgtggtggagggagggacggcaactttggtggccgtggcggacctagaggtgtt
ggatttggtggaccggatggcggttgggataggaatgatagattcaaggattcccgtggt
gggcgcggcagagggcgatttgataacagaagagatggcgaccgtagcaggggaagaagc
tatagccgaagccgcagccggagccggtcacgtagccgtagctggtcacgcagccggagc
cgtagtcgcagccgcagccggacacctgtaaggcgtgaaagacggcgtgaatcaaaattc
gatcagaaagaagcagaagtgccggttgttggtctaaattctgaagcgatggggatgcaa
ccagacgttcgacctgagagtagcgttggtgtaaatcaaattgctgaaccctga
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integrated database retrieval system
