Helianthus annuus (common sunflower): 110889866
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Entry
110889866 CDS
T05101
Name
(RefSeq) ATP-dependent RNA helicase-like protein DB10 isoform X1
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
han
Helianthus annuus (common sunflower)
Pathway
han03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
han00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110889866
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
han03041
]
110889866
03009 Ribosome biogenesis [BR:
han03009
]
110889866
Enzymes [BR:
han01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
110889866
Spliceosome [BR:
han03041
]
Complex A
U1 snRNP components
U1 related factors
110889866
Complex B
110889866
Ribosome biogenesis [BR:
han03009
]
Eukaryotic type
Pre-60S particles
Helicases
110889866
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
WW
ERCC3_RAD25_C
Motif
Other DBs
NCBI-GeneID:
110889866
NCBI-ProteinID:
XP_021993133
LinkDB
All DBs
Position
5:123628336..123634235
Genome browser
AA seq
973 aa
AA seq
DB search
MTAEGASDSSGPRYAPPDPTLPEPWKGLIDGSSGVMYYWNPETNITQYEKPTAVPPPVPS
GPPSVPSASKPVSAPGTMSEQPNGIPGQQAPQMFSTPEQMPPQQGNNIPQSYQSINMEQS
QGYQYTHNQPMHYMGYQQRPPNMMQPPQHSHVQNQPSDVNSVQAPPTQYGGSQFNMQQPS
PFGQLQQSGVDYQQHGPNFQNQMGQQPNVPPVGSNMSFADNLPGRGGNDQYFNAKNGVPA
MSPHQPKLAAIPMARTQPGGPTSHNMYGQATGGPPYMNNSMMMANPAVMGPPDAMALSSV
EVYRKKHDVTATGDNVPAPFMSFESTGFPPELLREIYAAGFASPTPIQAQTWPIALQNRD
IVAIAKTGSGKTLGYLIPAFMLLRHCNNNPQNGPTVVVLAPTRELATQIQDEAIKFGRSI
RISCTCLYGGAPKGPQLKELERGADIVVATPGRLNDILEMRKVDFRQVSLLVLDEADRML
DMGFEPQIRKIVNEIPPRRQTLMYTATWPKEVRKIAGDLLVNPVQVNIGNADELAANKSI
TQYVEVVPQMEKQRRVEQILRSEERGSKIIIFCSTKKLCDQLTRSISRNFGAAAIHGDKS
QGERDFVLNQFRSGKSPILVATDVAARGLDIKDVRVVINYDFPNGVEDYVHRIGRTGRAG
AKGVAYTFFSEQDWKHAADLIKVLEGANQPVPNQVREIATRGAPGFGKDRGGMSRFDSGG
GGGRWDSSGGRGGMRDGGFRGRGFDSRDGGFGGRGGGGVPGGGDMRDGRFGGPRDDGLSG
RGGFGGRGGQRDDGFGGRGGMRDGGNFGGRGGGRDGNFGGRGGGRDGNFGGRSGGRDGNF
GGRGGPRGVGFGGPDGGWDRNDRFKDSRGGRGRGRFDNRRDGDRSRGRSYSRSRSRSRSY
SRSRSRSWSRSRSRSRSWSRSRSRSRTPVRRERRRESKFDQKAPDVPVAGLNSEPGVMQQ
PESSVAVNQIAEP
NT seq
2922 nt
NT seq
+upstream
nt +downstream
nt
atgactgctgagggggcctctgattcttcgggtcctcgttatgctccacctgatccaact
ttgcctgaaccctggaagggtttaatcgatgggagctcaggtgtgatgtactattggaac
cctgaaactaacatcactcagtatgagaaacctactgctgtgccgccaccggtgccatca
ggcccaccttctgtgccctctgcatctaaacccgtgtctgcaccgggtactatgtcagaa
cagccaaatggtattcctggtcaacaagcacctcaaatgttttctacaccagaacaaatg
ccacctcagcaaggtaataacatacctcaatcataccagagtattaatatggaacagtca
cagggctaccagtatacacataatcaaccgatgcattacatggggtaccaacagaggcca
cccaatatgatgcagccacctcagcattcacatgttcaaaatcaaccttcagatgttaat
tccgttcaagcaccccctacacaatatggtggctctcagttcaacatgcaacaaccatcg
ccatttggtcagttgcagcagagcggtgttgactatcagcaacatggaccaaattttcag
aatcaaatgggtcagcagccaaatgttccaccggtaggatcgaatatgagctttgcggat
aatctacctggaagaggtgggaatgatcagtattttaatgctaaaaatggtgtgcctgct
atgtcccctcatcaacccaagcttgcagcaattccaatggcaagaactcagcctggtgga
cccacctcgcataacatgtatgggcaagctactggcggccccccatatatgaataactct
atgatgatggcaaatccagcagtaatgggccctccagatgctatggctctatcatctgtt
gaagtttaccgtaaaaaacatgacgtcacagcaacgggtgataatgttccagctccattc
atgtcatttgagtccactggattccctccagagttattgagagagatatatgctgctggt
tttgcttcgcctacacctattcaagcacaaacatggcctattgctctacaaaacagggac
atagtggcaattgcaaagacaggttctggtaaaacgttaggctatctgattcctgcgttc
atgctgcttagacattgtaacaacaatccccaaaatgggcccacagtcgttgttttagct
cccactagagaacttgctactcaaatacaagatgaggccatcaagtttggccgatccatc
agaatctcttgcacatgtttgtatggtggggctcctaagggaccacaactgaaggaatta
gaacgaggagcggatattgtggtagcaactccgggtcgactaaatgatatacttgaaatg
aggaaggttgactttcgtcaagtttctcttcttgtgcttgatgaggctgatagaatgctt
gatatgggtttcgaacctcaaataaggaagattgttaatgaaatacctcctcgaaggcag
acgctaatgtatactgccacttggcccaaagaagtgaggaaaatagctggtgatcttctg
gtcaatcctgttcaggtcaacattggcaatgcagatgagcttgctgcaaacaagtctatt
acacagtatgtggaagtggtccctcaaatggagaagcagaggcgtgtggagcagattctg
agatctgaagaaaggggttccaaaattattattttctgttcaactaaaaaattatgtgat
cagcttacacgtagtattagtcgtaatttcggggctgctgccattcacggagacaagtct
cagggtgagcgagactttgttctcaatcagttccgttctggaaagtccccgatattagtt
gctactgatgttgctgcacgtggccttgacatcaaggacgtcagggtggtgattaattat
gatttcccgaacggtgtggaggactatgtccaccgaatagggcggacgggaagggcaggg
gcaaaaggggtggcttacactttcttttctgaacaggattggaaacacgctgctgatctt
attaaagttctcgagggagctaatcagcctgtgccaaatcaggtgcgagagattgcgaca
cgtggggcgcctggatttgggaaggaccggggtggaatgagccgctttgattctggaggt
ggtggcgggcgctgggattctagtggtggtcgtggtggcatgagggatggtggttttagg
ggtcgtggttttgattcaagggatgggggttttggtggccgtggtggtggtggtgttcct
ggtggaggtgacatgcgggatggtagatttggtggcccaagggatgatggtttaagtggt
cgtggtggctttggaggtagaggtggccagagggatgatgggtttggtggtcgtggtgga
atgagagatggtggcaactttggaggtcgcggtggagggagggacggcaactttggaggt
cgcggtggagggagggacggcaactttggaggtcgcagtggagggagggacggcaacttt
ggaggtcgtggtggacctagaggtgttggttttggtgggccggatggcggttgggatagg
aatgatagattcaaggattcccgtggtgggcgtggcagagggcgatttgataacagaaga
gatggtgatcgtagcaggggaagaagctatagccgaagccgaagccggagcaggagttac
agccggagccggagccgtagctggtcacgcagccggagccgtagccgtagttggtcacgc
agccggagcaggagtcgcacacctgtaaggcgcgaaagacggcgtgaatctaaatttgat
cagaaagcaccagacgtgcctgttgctggtctaaattctgaaccgggggtcatgcaacag
cctgagagtagcgttgcggtaaatcaaattgcggaaccgtaa
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integrated database retrieval system
