Helianthus annuus (common sunflower): 110890163
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Entry
110890163 CDS
T05101
Name
(RefSeq) nuclear cap-binding protein subunit 1
KO
K12882
nuclear cap-binding protein subunit 1
Organism
han
Helianthus annuus (common sunflower)
Pathway
han03013
Nucleocytoplasmic transport
han03015
mRNA surveillance pathway
han03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
han00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110890163
09122 Translation
03013 Nucleocytoplasmic transport
110890163
03015 mRNA surveillance pathway
110890163
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
han03019
]
110890163
03041 Spliceosome [BR:
han03041
]
110890163
Messenger RNA biogenesis [BR:
han03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Cap binding complex
110890163
Spliceosome [BR:
han03041
]
Common components
Common spliceosomal components
Cap binding complex
110890163
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MIF4G_like
MIF4G_like_2
MIF4G
DUF7801
Motif
Other DBs
NCBI-GeneID:
110890163
NCBI-ProteinID:
XP_021993423
LinkDB
All DBs
Position
11:46949290..46957103
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AA seq
854 aa
AA seq
DB search
MSSSWRTLILRIGEKSPEYGGVIDFKDHIDACFGAVRRELDHSHDDILTFLLQCSEQLPH
KIPLYGTLIGLLNLEDEDFVKKVLESTQNSLQDALDSGDCNKIRVTMRFLTVLMCSKVIQ
PSSLVVIFETLLSSAATIVDDEKGNPSWQARADFYITCILSCLPWGGAELVEQIPEEVER
VMVGIEAYLSIRRRVSDVGLSVFEDINKSNKLLVEQDFVEDLWSRIQDLAKNSWKLESVP
RPHLLYEAQLVAGKSHDFGPIVCQEQPDNPVELSRINFGRQRHEAELKYPQRIRRLNIFS
ASKIEDLQPIDRFVVEEYLLDVLFYLNGCRKECAACMVGLPVPFRYEYLMAETIFSQLLL
LPQPPFKPIYYTLVIIDLCKSLPGAFPAVVAGAVRALFDRISELDMDCRTRLILWFSHHL
SNFQFIWPWEEWAYVLDLPKWAPQRVFVQEVLDREVRLSYWDKVKQSIESTPALEELLPP
KGGPDFRYISDDGDKTEYTLSKELNSMVKGRKTAREIIIWLEETVIPVNGLDVCLRVVVQ
TLLDIGSKSFTHLITVLERYGQVIAKICPNEETQIMLISEVSSFWKNGAQTTAITIDRMM
GYRLISNLAIVKWVFSPSNIDLFHTTDRLWEILRNALNKTYNRISDLRKEMANLKKSVVK
AEKIAAMAKAELDGAESKLMLVDNEPVVGEHPAKMKRLISNAEKTKADEVSARESLESKE
ALFARALEENEALFLSLYKNFSTVLMERLHETFGEKTLDHKDGDSEAMAVDEDDTSAMET
DKENGNSKRNSGYIIGEKEQWCLSTLGYVKAFSRQYASEIWPHMDKLEEEVVTESVHPLF
RKAVYSGLRLQVDQ
NT seq
2565 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcagttggagaaccctaattctaagaatcggcgagaaatcccctgaatacggt
ggagttatcgatttcaaagaccacattgatgcctgcttcggtgctgttcgtcgtgaatta
gatcattctcatgacgatatcttaacttttcttctacaatgttcagagcaactgcctcac
aagattcctttgtatggaacattgattgggctgttgaatttggaggacgaggattttgtt
aagaaagtgttggagagtactcaaaatagtttgcaggatgcattggactccggggattgc
aacaagattcgtgtaacaatgcggtttttaactgttttgatgtgtagcaaagtgatccaa
cctagctcactagtggtgatattcgaaacattattatcatccgctgcaaccattgtggac
gatgaaaaagggaacccttcatggcaagcgcgtgctgatttctacattacctgtattctt
tcctgccttccttggggtggtgctgaacttgttgagcaaattcccgaagaagttgaaaga
gttatggttgggatagaagcctatttaagtatcagaagacgtgtttctgatgtcggtcta
tctgtgtttgaggatatcaacaaaagcaacaaacttcttgttgaacaggattttgtggaa
gacttatggagtcgaattcaagatctcgccaagaacagctggaaactcgagagtgttcca
aggccacatcttctctatgaagcacaactagtagcagggaaatctcatgattttggacca
atcgtttgtcaggagcaacctgataaccctgtggaactttctagaatcaatttcggtaga
caaagacacgaggcagaattgaaatatcctcagagaatacgtaggctcaatatattttcc
gctagcaaaattgaggatttacaacctatagaccgttttgttgtggaagagtatttattg
gatgtgctcttttatctaaacggatgtcgaaaggaatgtgctgcatgcatggttggtcta
cctgtccctttcagatatgaatatctcatggccgaaaccattttttctcagcttcttcta
ttgcctcagccaccgtttaagcccatatattacacgcttgtcataatagacctttgtaag
tctcttccaggtgcttttcctgcagttgtagctggggctgtgcgggccctatttgatagg
ataagtgagttagacatggattgtaggacccgtctcattctttggttctcacatcactta
tcaaactttcaattcatctggccatgggaagaatgggcttatgtcttggatcttccaaaa
tgggccccacaacgtgtgtttgttcaggaggttcttgatagggaagtccgtttatcatac
tgggacaaagtgaagcagagcattgaaagtactccggctttagaggagttacttcctccg
aaaggtggtcccgacttccgatacatctcagacgatggtgataaaaccgaatacacactt
tcaaaagaactcaacagtatggtaaaaggaagaaaaaccgcacgcgaaattattatttgg
ctcgaagaaaccgtaatcccagtcaacggactagatgtttgtctaagagtcgttgtgcaa
acccttttggatattggatcaaaaagctttactcatttgattactgtgttagagagatac
ggacaagttatcgccaaaatttgtccaaacgaagaaacacaaattatgctaatatccgaa
gtcagttcgttttggaaaaacggtgctcaaacaaccgccataaccatcgacagaatgatg
ggttatcggttaatttctaatttagctattgtgaaatgggttttttctccgtcaaatatt
gacctatttcacaccaccgatcgtttgtgggagattctcagaaatgctctgaataagacg
tataatcgtatttctgatttaagaaaagagatggctaatttgaaaaagagtgttgtaaaa
gccgagaaaattgcagccatggctaaagctgagctggatggtgctgaaagtaagcttatg
cttgtggataatgagcctgttgttggtgaacatccagctaagatgaaacgtttgatttca
aatgctgaaaagacaaaagcggatgaggtgtctgctcgtgaatctttagagtcaaaggag
gctctttttgcacgagctcttgaagaaaatgaggccttgtttctgtcgttatacaaaaat
ttctcgactgttttgatggaacgtcttcatgaaacatttggagagaaaaccttggaccac
aaggatggtgattcagaagcaatggccgttgatgaagatgacacttctgcaatggagacg
gataaagaaaatggaaattccaagagaaactccggatatatcattggggagaaagaacaa
tggtgtttgtcaactctgggctatgtcaaggctttttcaaggcaatatgcttctgagata
tggccacacatggataagttagaggaggaagtagtaaccgaaagcgttcatcctctgttc
agaaaagcagtttattctggcttgcgcctgcaagtcgatcaatga
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