Helianthus annuus (common sunflower): 110890996
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Entry
110890996 CDS
T05101
Name
(RefSeq) cell division cycle protein 48 homolog
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
han
Helianthus annuus (common sunflower)
Pathway
han04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
han00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
110890996
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
han03019
]
110890996
03009 Ribosome biogenesis [BR:
han03009
]
110890996
04131 Membrane trafficking [BR:
han04131
]
110890996
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
han04147
]
110890996
Messenger RNA biogenesis [BR:
han03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
110890996
Ribosome biogenesis [BR:
han03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
110890996
Membrane trafficking [BR:
han04131
]
SNARE
SNARE associated proteins
Others
110890996
Autophagy
Aggrephagy
Other aggrephagy associated proteins
110890996
Exosome [BR:
han04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
110890996
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_16
CDC48_2
AAA_2
AAA_33
AAA_5
AAA_22
AAA_14
TIP49
NPHP3_N
RNA_helicase
AAA_17
nSTAND3
Mg_chelatase
AAA_28
ATPase_2
Parvo_NS1
AAA_18
IstB_IS21
ABC_tran
AAA_7
Vps4_C
Viral_helicase1
NB-ARC
AAA_24
NACHT
TsaE
Zeta_toxin
DUF815
AAA_lid_PRS2_C
Zot
Motif
Other DBs
NCBI-GeneID:
110890996
NCBI-ProteinID:
XP_021994345
LinkDB
All DBs
Position
11:complement(166759107..166765730)
Genome browser
AA seq
807 aa
AA seq
DB search
MSDQPESSSEPKGSKKDFSTAILERKKSPNRLVVDEAVNDDNSVVAMHPVTMEKLQLFRG
DTILIKGKKRKDTVCIALADESCEEPKIRMNKVIRTNLRVRLGDVVSVHQCLDVKYGKRI
HVLPLDDTVEGVTGDLFDAYLKPYFLEAYRPVRKGDHFLVRGGMRSVEFKVIETDPGEYC
VVAPDTEIFCEGEPIKRDDEDRLDEIGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGV
KPPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEK
NAPSIIFIDEIDSIAPKREKTNGEVERRIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDP
ALRRFGRFDREIDIGVPDEVGRLEVVRIHTKNMKLSDDVDLEKIAKETHGYVGADLAALC
TEAALQCIREKMDVIDLEDDSIDAEILNSMAVTNEHFQTALGTSNPSALRETVVEVPNVS
WEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANEC
QANFISIKGPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQRGSSSGDAGG
AADRVLNQLLTEMDGMSAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEDSRHQ
IFKAAMRKSPVSKDVDLRALAKYTQGFSGADITEICQRACKYAIRENIEKDIEKERKRSA
NPDSMDEDEDEVADIKAAHFEESMKYARRSVSDADIRKYQAFAQTLQQSRGFGSEFRFPE
AASGAGGGGSDPFAASAGGADDDDLYS
NT seq
2424 nt
NT seq
+upstream
nt +downstream
nt
atgagcgatcaaccggagtcttcgtcagaaccaaaaggttcgaaaaaggacttttcaaca
gctatcttggagcgcaagaaatctccgaaccggctcgttgttgacgaagcggttaatgat
gataactcagtggttgctatgcatcctgttacaatggagaaattgcagctgtttcgtggt
gatacgatactgattaaggggaagaaaaggaaagatacggtttgtatcgcgcttgctgat
gaaagttgtgaagagccaaagattagaatgaacaaggttattagaacaaacctccgggtt
cggctcggtgatgttgtatcggtgcaccagtgtctggatgtgaagtacgggaaacggatt
cacgtgcttccattagacgacaccgttgaaggtgtcacaggggacctgtttgatgcatat
ctaaaaccttactttttggaggcgtatagacccgttagaaaaggggatcattttcttgtt
agaggaggtatgagaagcgtagagtttaaagtaatcgaaaccgacccaggggagtactgc
gttgttgcaccggataccgaaatcttttgtgagggtgagccgatcaagcgggatgatgag
gatcggttggatgaaatcggttacgatgacgttggtggggtccggaaacaaatggctcag
attcgtgaactggttgagttaccgttacgacaccctcaactgttcaaatcgatcggagtt
aaaccccctaaaggtatcttactctacggaccccccggttcgggcaaaacactcatcgca
agagccgtagctaacgaaaccggagcattctttttctgtatcaacgggccggaaattatg
tcgaagttagctggagagagtgagagtaatctccggaaggcatttgaggaggctgaaaag
aacgccccatcgattatttttattgatgagattgattcgattgctcccaaacgggaaaaa
actaacggtgaagttgaaaggaggatcgtttcacagttactgacgcttatggatgggtta
aaatcgcgtgcacatgttattgtaatgggggctacgaatcggccgaacagtattgatcct
gctttgagacggtttggtaggttcgatagagaaattgacattggtgtccctgatgaagtt
gggcgtcttgaggttgttcgtattcacaccaagaacatgaaactttctgatgatgttgat
ttggaaaagatagctaaagaaacacatggttatgtcggtgctgatctggctgcactctgc
accgaagctgcactacaatgcattagagagaaaatggatgttattgacttggaagatgac
tctattgatgctgagatactgaactcaatggcagtaacaaacgagcattttcagacagct
cttggaacaagcaatccctctgctttgcgcgagactgttgtggaggttcccaatgtcagc
tgggaggatattggaggtcttgaaaatgttaagcgtgagctgcaggagactgtccaatat
cccgtggagcatccggagaaattcgagaaatttggcatgtcaccatcaaaaggtgttctt
ttctatggcccacctgggtgcggcaagacacttctagctaaggctattgcaaacgagtgt
caagccaacttcattagcatcaaagggcccgagttgcttacaatgtggtttggtgagagt
gaggccaatgttcgtgagatctttgataaggcccgtgggtctgcaccgtgtgtcctcttc
ttcgatgaactcgattctattgcaacccagaggggaagtagttctggagatgcaggtggt
gcagctgatcgcgtgttgaatcagttattaacggaaatggacggaatgtctgccaaaaag
acggttttcataatcggagccacaaatagacccgacatcattgaccctgcattactccgt
ccagggcgtcttgatcaacttatttatattccgctaccagatgaggactcgcgccaccag
attttcaaggcggcaatgaggaagtctccggtttccaaggatgttgatttgagagcttta
gctaaatatacacaaggctttagtggggccgatattacagagatatgtcaacgtgcctgc
aagtatgcaatccgagagaacatcgagaaggatatagagaaggaaaggaagagaagtgcg
aatcccgactctatggatgaggatgaagatgaggtggcggacattaaggctgcccacttc
gaggaatccatgaaatatgcacgcagaagtgtgagtgatgctgacataaggaagtaccag
gcgtttgctcagacgttgcagcagtctcgagggtttgggtcggaattccggttccctgaa
gcggcatctggagctggtggcggtggatctgacccgtttgccgcctctgctggtggagct
gatgatgatgacttgtacagctag
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