KEGG   Helianthus annuus (common sunflower): 110891152
Entry
110891152         CDS       T05101                                 
Name
(RefSeq) protein SEH1
  KO
K14299  nucleoporin SEH1
Organism
han  Helianthus annuus (common sunflower)
Pathway
han03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:han00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    110891152
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:han03019]
    110891152
   04131 Membrane trafficking [BR:han04131]
    110891152
Messenger RNA biogenesis [BR:han03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     110891152
Membrane trafficking [BR:han04131]
 Autophagy
  Other autophagy associated proteins
   SEACAT/GATOR2 complex
    110891152
SSDB
Motif
Pfam: Beta-prop_THOC3 WD40 WD40_CDC20-Fz ANAPC4_WD40 Beta-prop_WDR3_1st WD40_WDHD1_1st Beta-prop_WDR5 WD40_Prp19 Beta-prop_EML_2 Beta-prop_RIG_2nd Beta-prop_Aladin EIF3I Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd Beta-prop_IFT122_1st Beta-prop_IFT140_1st Beta-prop_WDR3_2nd Beta-prop_EML Beta-prop_NUP159_NUP214 Beta-prop_WDR35_TULP_N
Other DBs
NCBI-GeneID: 110891152
NCBI-ProteinID: XP_021994509
LinkDB
Position
13:complement(141281042..141287461)
AA seq 322 aa
MEKSIATLDKGTICSSWNYCGQRLATGLIDGIIAIFDTSDPASSFFTSTFKFKVNNGSIT
KVVWVPPEYGDAIACICSDGSLSIWEEISEDSEPVQWKQCTSFGGPLDQVLDGQFGNSVS
SLKLTVAYSNGLVKVYEILDSMELKNWQLQAEFQNVTDSLAKFGKASCSLASISWNPQRS
ESRPASFVLGFNSDTPQLNSPKVWEFDQDHQRWLPVAELGDNGDLVNALAWAPNIGRPYE
LIAVATSKEISIWQMASNPDANGRLSVEKVGMFPCHDNQVWQMEWDMSGMTLATSGTDGR
VRLWQSNLNGIWHEQAVIESAT
NT seq 969 nt   +upstreamnt  +downstreamnt
atggagaaatcaatcgcaacgttagataaaggtacgatttgttcttcatggaactactgt
ggtcaaagattagccaccggtttaatcgatggaattatagcaatcttcgacaccagtgac
cccgcttcttcattcttcacatccactttcaaattcaaggttaataatggaagcattaca
aaagttgtgtgggttcctccagagtatggtgatgcaatcgcatgcatatgttccgatgga
agtttgtcaatttgggaagaaatatcagaagacagtgagcctgttcagtggaagcaatgc
acaagctttggtggacctttggatcaagttctagatggtcaatttggaaactccgtctca
agtttgaaattgacagttgcttattcaaacggccttgtgaaagtgtatgaaatcttagat
tcaatggaactgaagaactggcaacttcaggctgaatttcagaatgttacagattcatta
gctaaatttggcaaggcttcatgttcattagcatcaatttcttggaacccgcaaagaagt
gaaagccgtcctgcaagttttgtgttgggttttaactcagatactccacaattgaattct
cccaaggtatgggaatttgatcaagatcatcaaagatggcttcccgttgcagaacttggt
gacaatggtgatcttgttaatgctctggcatgggctccaaacattggaaggccgtatgag
ttgatagctgttgcaacatccaaagagatttcgatatggcaaatggcatcaaaccctgac
gctaatggaaggctttcggttgaaaaagtcggcatgtttccttgccatgacaatcaggtg
tggcagatggagtgggatatgagcggaatgacgctagcaacttctgggactgatgggagg
gtgagattgtggcagtcaaaccttaatggaatttggcatgaacaagcagtcattgaatct
gcaacataa

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