Helianthus annuus (common sunflower): 110891279
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Entry
110891279 CDS
T05101
Name
(RefSeq) cell division control protein 48 homolog D
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
han
Helianthus annuus (common sunflower)
Pathway
han04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
han00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
110891279
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
han03019
]
110891279
03009 Ribosome biogenesis [BR:
han03009
]
110891279
04131 Membrane trafficking [BR:
han04131
]
110891279
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
han04147
]
110891279
Messenger RNA biogenesis [BR:
han03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
110891279
Ribosome biogenesis [BR:
han03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
110891279
Membrane trafficking [BR:
han04131
]
SNARE
SNARE associated proteins
Others
110891279
Autophagy
Aggrephagy
Other aggrephagy associated proteins
110891279
Exosome [BR:
han04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
110891279
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_16
AAA_2
CDC48_2
AAA_33
AAA_5
AAA_22
AAA_14
TIP49
NPHP3_N
RNA_helicase
AAA_17
nSTAND3
Mg_chelatase
AAA_28
ATPase_2
AAA_18
Parvo_NS1
nSTAND_NTPase5
ABC_tran
Viral_helicase1
NB-ARC
Vps4_C
AAA_7
NACHT
TsaE
AAA_lid_PRS2_C
IstB_IS21
DUF815
Zeta_toxin
AAA_24
Zot
TEX19
Motif
Other DBs
NCBI-GeneID:
110891279
NCBI-ProteinID:
XP_021994667
LinkDB
All DBs
Position
11:complement(179397945..179402079)
Genome browser
AA seq
808 aa
AA seq
DB search
MSNQPESSDSKGTKRDYSTAILERKKAANRLVVDEAVNDDNSVVAMHTDTMEKLQLFRGD
TILIKGKKRKDTVCIALADDTCDEPKIRMNKVVRANLRVRLGDVVSVHQCADVKYGKRVH
ILPVDDTIEGVTGNIFDAYLKPYFLEAYRPVRKGDFFLVRGGMRSVEFKVVETDPAEYCV
VAPDTEIFCEGEPIKREDEDRLDEIGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVK
PPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKN
APSIIFIDEIDSIAPKREKTNGEVERRIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDPA
LRRFGRFDREIDIGVPDEVGRLEVLRIHTKNMKLADDVDLEKISKETHGYVGADLAALCT
ESALQCIREKMDVIDWEEESIDAEILNSMAVTNEHFKTALGSSNPSALRETVVEVPNVSW
EDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQ
ANFISIKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRGSSQGDAGGA
ADRVLNQLLTEMDGMSAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEESRYSI
FKSALRKSPVAKDVDLHALAKYTQGFSGADITEICQRACKYAIRENIEKDIEREKRRSEN
PEAMDEDVDDEVAEIKATHFEESMKFARRSVSDADIRKYQAFAQTLQQSRGFGSEFKFAE
TSGAAAGAGSSDPFAASAGAADEDDLYN
NT seq
2427 nt
NT seq
+upstream
nt +downstream
nt
atgagcaatcaacctgaatcatccgactctaagggcacgaagcgtgattacagtacggcc
attctggaacggaagaaggctgccaacagattggttgttgatgaagctgttaatgatgat
aattctgttgttgccatgcatacggacacaatggagaagcttcagctttttagaggcgat
accatcttgattaagggaaagaaaagaaaagatactgtatgtatagctcttgctgatgac
acatgtgatgagcccaaaattagaatgaacaaggttgtcagggctaacctacgggtcagg
ctcggcgatgtagtatcggttcaccaatgtgctgatgtgaaatacggcaaacgggttcac
atccttccagttgatgataccattgaaggcgtcaccggcaatatctttgacgcctactta
aaaccatactttttggaagcatatcgacccgttagaaaaggcgactttttcctcgtgagg
ggaggcatgcgatccgtagagttcaaagttgtcgaaaccgatcctgcagaatactgtgta
gtggcaccagataccgagattttctgtgaaggcgagcccattaaacgggaggatgaagat
cgattagacgaaatcggttacgatgacgttggtggtgtccgcaaacaaatggcccaaatc
cgtgagcttgtcgagcttccgttaagacatccgcagcttttcaagtcaatcggggtcaaa
ccaccgaagggtattcttctttacgggcctcccgggtcgggtaagacgttaatagcccga
gctgttgctaacgaaacgggcgctttctttttctgtataaacggcccggaaatcatgtcg
aagttggctggagaaagcgagagtaatttacgaaaggcgtttgaggaagcggagaagaac
gcgccgtcgattatttttatcgacgaaatcgattcgatcgctccgaaacgggaaaaaaca
aatggagaagttgaaagaaggattgtttcacagcttttgacgctaatggacgggctgaaa
tcacgggcccatgttatcgtcatgggtgcgactaaccgtcccaacagcattgacccggct
ttgaggcgattcggtaggtttgaccgggaaatcgatatcggtgttcctgacgaagtgggt
cggctcgaggttcttcgtattcataccaagaacatgaagctggctgatgatgtggacttg
gaaaagatttcgaaagagacacacgggtatgtaggtgctgacctggcggctttgtgtacc
gagtcggcactccagtgtattcgagagaagatggatgtgattgattgggaagaagagtcg
atcgatgcggagattcttaattctatggcggttacgaacgagcatttcaaaaccgcactt
ggttcaagcaacccgtctgcgcttcgtgagacggttgttgaagtgccgaacgttagttgg
gaagatatcggtggcctcgaaaatgttaaacgagagctccaagagaccgtacaatatcca
gtcgaacaccctgaaaagtttgagaaattcggcatgtcaccatctaaaggagtcctgttt
tacggtccacccgggtgtggaaaaacgcttctagccaaggctattgccaatgaatgccaa
gctaacttcatcagcatcaagggtccggaactgctaaccatgtggttcggtgaaagtgaa
gctaacgttcgtgagatctttgataaggcccgtcagtccgctccctgtgtcctgtttttc
gatgagctggactccattgctacccagagagggagtagtcaaggagacgcaggcggtgcg
gccgacagggttttgaaccaacttttgaccgaaatggacgggatgtcggctaagaaaaca
gtttttattatcggtgcaactaacaggcccgatattattgatccagcccttttgaggccc
ggtcgtcttgaccagttaatttacattcctctccctgatgaggaatcccgttactcgatt
ttcaaatcagcgttaagaaaatcgcctgttgcaaaagacgttgatcttcacgcacttgct
aaatacactcagggatttagcggtgctgacattactgaaatctgccagcgcgcgtgcaag
tacgccattcgtgaaaacattgaaaaagatattgagagggagaagagaagaagcgagaac
ccggaggcaatggacgaggacgtggacgatgaggtggcggagatcaaggcaacacatttt
gaagaatcgatgaaatttgcgcgtagaagtgttagtgacgctgacatacgtaaataccag
gcgtttgctcagacgcttcagcagtcgagagggtttgggtccgagttcaagtttgctgag
acaagtggtgcagccgctggtgcgggtagctcggacccatttgctgcttctgcaggggca
gctgatgaggatgacctatataactaa
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