Helianthus annuus (common sunflower): 110891467
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Entry
110891467 CDS
T05101
Name
(RefSeq) vacuolar protein sorting-associated protein 8 homolog
KO
K20178
vacuolar protein sorting-associated protein 8
Organism
han
Helianthus annuus (common sunflower)
Pathway
han04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
han00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
110891467
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
han04131
]
110891467
Membrane trafficking [BR:
han04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
110891467
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_Vps8
Beta-prop_VPS8
VPS8_N
TPR_Vps41
Clathrin
Beta-prop_EML_2
Beta-prop_WDR5
TPR_VPS8_2
WD40_CDC20-Fz
Beta-prop_WDR3_1st
Beta-prop_RIG_2nd
WD40_Gbeta
Beta-prop_TEP1_2nd
ANAPC4_WD40
WD40_WDHD1_1st
WDR55
Beta-prop_EML
WD40_Prp19
WD40
Beta-prop_THOC3
Beta-prop_HPS5
Beta-prop_Aladin
zf_RING_Vps8
Motif
Other DBs
NCBI-GeneID:
110891467
NCBI-ProteinID:
XP_021994846
LinkDB
All DBs
Position
13:complement(173411775..173423490)
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AA seq
1776 aa
AA seq
DB search
MELDLDAFLQSHDTSTSDDEDDHHHRSTVDELLLIDSDDDDGSSSSDNTDANSSDYMQLT
TSQLGTDGDRPSKFRSTSQSETFSQLPRLFRSNAKPGAALAAAAAASRLIPTPHAAAIKL
TREKSGTETLDPKPEIGHLDVKLVDDDLKPVELTGNSQLCGELITEHKNNSAWSLKGEVF
SNEELATDVADASEVDGFDLDFRDDTLSSAAKPEIGSDKDGARSVLDDTSNDYIEGNSAP
TITVDYIEGQDMDAKEDSVSVSSGKIDAENLQLYEKGVEHGFQAEVDDRPAQTVDMGGIV
IHQGSDKSDGGTQETLSKPLEFAEELEKKHAFTGLHWEEGAAAQPMKLEGVHTGSTALAY
FSTSTDNTITRTISSPSFRRDHGTPQALAVHLNYIAVGMSRGLIVVVPSKYSPHYADNMD
AKMLMLGLQGDRSYAPVTSMSFNHQGDLLFAGYADGHYTVWDVQRVTAAKVVAEHKAPVV
HMLYLGMDSQVARQFNMVSGDSKGVVKSIRFSPSSWLSRFSTSKTSTLLDESTSTVVCAS
PLVPEEKFGGSSASTSIESMMGGDLLSAEEGVVIFVTHQSALVAKVITTPPEVYGQLPKP
DGVREGSMPYAAWKYIVPSHGSAAENVQVMEPATVPLLAIAWDNQVQVAKLVKSELKLYA
KWTLDSSAIGIAWLDDQMLVVLTSAGQLCLYANDGTLIHDTSFAVDGGRGDDVIGHHTHF
SNVLGKAHHNCIAVRGASLYLLGPTHLVVSRLLPWKERIEVLRRGGDWMGAFNMAMVLYD
GQAHGVFDLPRALDDVRKVIMGYLVELLLAYVDEVFSYISVASGNQLEHLNDSYSVTSEQ
YTSVGGVAVEFCVHIKRTDILFDEILSRFESVKQKETFLELLEPYILKDMLGSLPPEIMQ
ALVEHYSAKGWLQRVEQCVLHMDISSLDFNQVVRLCREHNLYRALIYLFNKGLDDFRTPL
EELLLVFKNSDSENAPSLGYRMLVYLKYCFSGFAFPPGHGTLPPARLPSLRRELIHFLLE
DSDAPSLTSLSAIKSYKNLYHLLELDTEATLDVLRCAFINESVVEKDSTSQNQDLTQKTV
DVLVLVLETNKSIQPDTNWPSKDDIGHMLEFISHFVSCGEAKVSNEYLGQIFEYLILDAS
IPANAKIREKEVLALLKVVPQTDWDDRHLLDMCEKAHFYQVCGFIYNSRHQYIAALDSFM
KDVDEPIHAFSYIHNLLSDKRLDYLEAAVISRIPDLVQISREGTFFLVVEHFFQEFQHIL
SELRTHPKSLFLYLKTVIEVYSKGTLSFSSLREGEPRGTRVKNETDDFLERLSEFPKSLR
ENPIHVTDEMTELYLELLCQYEPNSVLHFLETCESYRVDHCLRLCQEYKIIDGAAFLLER
VGDVGSALSFTLSDLVGKFCMLDAAAAQSVDDYAGVDHFSEVMNKEVNDILHIVRTCVGL
CQRNSSRLDPNESEALWFQLLDKFCEPLTDPCASKMDSEQNSSGSLKTTWKIRGSDKGAL
MLRKLFSIFIKEIVEGMIGYVRLPTVMMKLLSDNGSQEFGDFKPTILGMLGTYDFERRIL
DTARSLIEDDTYYTMTLLKRGASHGHGPQSLVCFICNCLVTKDSPSTTGIRVYSCGHASH
LHCDPASHTGCPICMPKKKGVRSRGNLLSAESGLVSKALPKHKSQATGAVHLLPQEKDGL
DRQISRYEILSNLDKDKKRIVQVDNMPQLRLAPPAVYQEKVKKGVAMLRGESSGVGGGLA
NKMKTGKQIKDLKTKGPAVRFPLKSNIFGKEKTSRR
NT seq
5331 nt
NT seq
+upstream
nt +downstream
nt
atggagctcgatctagacgcctttctgcaatctcacgacacctccacgagtgatgatgaa
gatgatcaccaccaccgcagcactgtcgatgaacttctcctcatcgactctgatgatgat
gatggctcttcttcctcagacaacactgatgccaattcttctgattacatgcaattaaca
acttctcagttgggaactgatggagatagaccgtcaaagtttcgctccactagtcaaagt
gaaactttcagccagttacctcggttattcaggtcaaatgctaaacctggggcagccttg
gcagccgctgctgcagcttcacgcttgattccaactccacatgctgctgctattaaactc
accagggagaaatctggtacagaaaccttggatcctaaacccgaaattggtcatttagat
gtaaaattagttgatgatgatcttaaaccggtagaattgactggaaattctcaactttgc
ggggaactgataactgaacataaaaataacagtgcgtggagtctcaaaggtgaagttttt
tctaatgaggagttggcaacagatgtagctgatgcctccgaggtggatggatttgatctt
gatttcagagatgatacacttagttctgctgcgaaaccagagataggctcagataaggat
ggtgcaaggtcagttttagatgacactagtaacgactacattgagggtaactcagcacct
actattactgtagactatattgagggacaggacatggatgctaaagaggactctgtaagt
gtatcatcaggaaaaattgatgctgaaaatttgcaactctatgaaaaaggtgttgagcac
ggcttccaagcagaagttgatgacaggccagcacaaactgtcgatatgggtggtattgtt
attcatcaaggaagtgataagagtgacggagggacacaagaaaccttatcgaagcccctt
gaatttgctgaggagcttgaaaagaagcatgcatttacgggtctgcactgggaagagggt
gccgctgctcaaccaatgaagcttgaaggtgttcacacgggatcaactgcgttggcttat
ttcagtactagtactgataacaccattaccaggacaatatcctctccatcatttaggcga
gaccacggaactccacaagccctagcagttcatcttaactacattgcagtgggaatgtca
agagggttaatcgttgttgttcccagcaaatactctccacattatgctgataacatggat
gctaagatgttaatgcttggattacaaggtgataggtcttatgccccagtcacatccatg
tcctttaatcatcaaggagacctcctttttgctggatatgctgatgggcattatactgtt
tgggatgttcaaagggtcactgctgcaaaagttgttgctgaacacaaagctccagtagtt
cacatgctatatctggggatggattctcaagtggctcgtcagttcaacatggttagcggt
gatagtaaaggtgttgttaagtcgattcgcttttctccatcttcatggctcagtaggttc
tctacatctaaaacctcgactcttcttgatgagtcaacaagcacagttgtatgcgcgtcg
cccttagtaccggaggaaaaatttggaggttcttccgcaagcactagcattgaaagtatg
atgggaggagatttactttccgctgaagaaggggtggtcatatttgtcactcatcagtct
gctctagtggccaaagtaataactaccccaccagaagtctacggtcagcttcccaagcct
gatggggttcgagagggttcgatgccttacgctgcttggaaatacatagttccctcacat
ggttctgctgctgagaatgtccaggtaatggagcccgcaactgtgccactgctcgcaatt
gcttgggataaccaagtacaggttgcaaaattggtgaagtcagaactgaaattatatgca
aaatggacccttgacagttcagcaataggaattgcttggctggatgatcagatgttggtg
gtgctaacatcagctggacagctctgtctgtacgcaaatgacgggactttaattcacgac
acaagttttgctgtggatggaggcagaggagatgatgtcattggacatcacacccatttc
tccaatgtccttggtaaagctcatcacaactgtatagctgttaggggtgcttctttgtat
ctacttggacctacacatcttgttgtttcccgccttcttccatggaaggaacgcattgaa
gttttgcgcagaggcggtgactggatgggtgctttcaacatggcaatggtgctttatgat
ggtcaagcccatggtgtgtttgatcttcctagagcattggatgatgttcgaaaagtaata
atgggctacctagtggagttgctattagcatacgtggatgaggtcttttcttatatatca
gtggcatcaggcaaccaactggagcacttgaatgatagttactctgtgacttcagagcag
tacacaagtgttggtggtgttgcagttgagttctgcgttcacatcaagagaaccgacatc
ctgtttgatgaaattttatcccgttttgagtctgttaaacaaaaagagacatttttggag
cttttggagccatatattttgaaggacatgcttggatcacttccacctgagattatgcaa
gcactggtggagcactatagcgcaaaaggttggctgcagcgggttgaacaatgtgttctt
cacatggacatttcttccctggactttaatcaggtcgtcaggttatgtcgagaacacaat
ttgtacagggcccttatatatttgttcaataagggtctggatgatttcagaacaccttta
gaggagctgcttctagtattcaaaaacagcgatagtgagaatgctccatcactcgggtac
aggatgctagtttacttgaagtactgcttttcaggctttgcttttcctccaggacatgga
actcttcctcctgcacgtttaccatctcttagaagggagcttatacacttcttactggag
gattctgatgctccaagtttgactagcttatcagccataaaatcatataagaatctctat
catctcttagagttggacactgaagcaacattagatgttttgagatgtgcatttataaat
gagtccgtagttgaaaaggattctacctctcaaaatcaagatctgacccaaaagaccgta
gacgttcttgttctcgtattagaaactaacaaatctattcaacctgacacaaattggcct
tcaaaggatgatataggtcatatgctagagtttatttctcattttgtttcctgtggagag
gccaaagtctcgaatgaatatctaggtcaaatatttgagtatttgatcttagatgctagc
attccagcaaatgctaaaataagagaaaaggaggtccttgcgcttttgaaagttgttcct
caaacagattgggatgacagacacctgttagacatgtgtgagaaggctcacttttaccag
gtttgtggcttcatttataacagcagacaccaatatatagctgctcttgatagcttcatg
aaagatgtggatgaaccaattcacgctttctcctatatccataatttgctgagcgacaag
aggctagattatttggaagcagcagtcatttcacgaattccagatttagttcaaataagc
agagagggcacattttttctagttgttgaacattttttccaagaatttcaacatatcttg
tcggagctgaggactcacccgaaaagtctctttctctaccttaagacagttattgaagtt
tattcaaagggaaccttgagcttcagttctctaagggaaggagaacctcgtggtacaagg
gtaaagaatgagactgatgattttttagaaagattatctgagtttccaaagtctttgcgc
gagaatccaattcatgtaactgatgaaatgactgagctgtatcttgagttactatgtcag
tatgaaccaaattctgtcctccattttcttgagacatgtgaaagctacagggtagaccat
tgtttacgcttgtgccaagaatataaaatcatagatggtgcagcttttttattagaaagg
gttggagatgttggaagcgctctttctttcacactttctgatcttgtgggtaaattttgt
atgcttgatgctgctgctgctcaaagtgtagatgattatgccggggtggatcatttcagt
gaggtcatgaacaaggaggtgaatgacatcttacatattgtgcgtacttgtgttggattg
tgtcaaaggaacagctctcgattagatcccaatgagtctgaggccctctggtttcagctg
cttgacaaattttgtgaacccttgacagatccatgcgccagtaagatggattctgagcaa
aactcatctggatcactcaaaactacgtggaagataagagggtcagataaaggtgcactc
atgttgagaaagttattttctattttcattaaagagattgttgagggaatgataggttat
gttcggttacctactgtcatgatgaaacttctttctgacaatggtagccaagagttcggt
gattttaagcctacaatactgggaatgcttggaacatatgattttgaaagaagaatattg
gacactgcgagatctttgattgaggatgatacatattataccatgacattactcaagaga
ggagcttctcatgggcatggccctcagagccttgtttgttttatatgtaattgtcttgtt
actaaggactctccctcgaccactgggatccgagtttatagttgtgggcatgcaagccat
ttgcattgcgatccggcctctcatacaggctgccccatttgtatgccaaagaaaaagggg
gtgaggtctagaggtaacttgctttctgctgagagtgggttggtaagtaaggcgttacca
aagcacaaatcacaagcaaccggggctgttcacctactcccacaggagaaagatggactt
gatcgtcagatatcaaggtatgaaatattaagtaaccttgataaagacaagaagaggatc
gtccaagtagataacatgccacagttgagacttgcaccgccagctgtctatcaagaaaag
gtgaagaagggagttgctatgttgaggggggaaagtagcggtgttggtggtggtcttgct
aacaaaatgaagacgggcaaacaaattaaagatctgaaaacaaagggaccagctgttcga
tttcccttgaaatcaaacatatttggcaaggaaaagaccagcagaagatga
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