Helianthus annuus (common sunflower): 110891485
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Entry
110891485 CDS
T05101
Name
(RefSeq) probable CCR4-associated factor 1 homolog 10
KO
K12581
CCR4-NOT transcription complex subunit 7/8
Organism
han
Helianthus annuus (common sunflower)
Pathway
han03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
han00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
110891485
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
han03019
]
110891485
Messenger RNA biogenesis [BR:
han03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
110891485
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
110891485
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CAF1
Motif
Other DBs
NCBI-GeneID:
110891485
NCBI-ProteinID:
XP_021994874
LinkDB
All DBs
Position
11:188577760..188579383
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AA seq
267 aa
AA seq
DB search
MSIEIREVWSDNLEQEFAIIREIVDDYPYIAMDTEFPGVVLQHLTPYKNITDYNYHTLKD
NVNMLKLIQLGLTFSDEDGNLPTSGSGKPCIWQFNFREFNVNQDIFANDSIELLKQSGID
FNKIAEKGVDNVRFGELLMSSGVVLNPNICWVTFHGGYDFGYLIKLLTRKELPGSQSVFF
GLMEVYFPVVYDVKHMMRFCNSLHGGLNKLAEILEVKRFGVCHQAGSDSLLTLHAFKKLK
ESYFSGSIEKYGGVLYGLGVDTDEQNK
NT seq
804 nt
NT seq
+upstream
nt +downstream
nt
atgtctattgagattagggaagtgtggagtgataatcttgaacaagaatttgcaataatt
agagagattgttgatgattatccatacattgcaatggatacagagtttcctggtgttgtg
cttcaacatttgacaccctacaagaacatcactgattataattatcatacattgaaggat
aatgtaaacatgttgaagttgatccaattgggtttgacattttccgatgaggatgggaat
cttcccacttccggttccggaaagccctgcatttggcagtttaactttcgcgagtttaac
gttaaccaagacatcttcgcgaacgattcaatcgagttgttgaaacagtccgggattgat
tttaacaagattgcggaaaagggtgtggataatgttcggtttggggagcttttgatgtcg
tcgggagttgttttgaatccgaatatttgttgggtgacttttcatggtgggtatgatttc
gggtacttgattaagttattgacgcgaaaggagttgcccggatcgcagtctgtgtttttc
ggtttgatggaggtttattttcctgtggtttatgatgttaaacatatgatgaggttttgt
aatagtcttcatggagggttgaataaactcgcggagatcttggaagtgaaaagattcggc
gtttgtcatcaagcgggttcggatagtttgctgacgcttcacgcgttcaagaaactgaaa
gagagttattttagtggatccatagagaagtatgggggtgttttgtatgggttaggggtg
gatacagatgagcaaaataagtag
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