Helianthus annuus (common sunflower): 110893681
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Entry
110893681 CDS
T05101
Name
(RefSeq) AMSH-like ubiquitin thioesterase 1
KO
K11866
STAM-binding protein [EC:
3.4.19.12
]
Organism
han
Helianthus annuus (common sunflower)
Pathway
han04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
han00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
110893681
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
han01002
]
110893681
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
han04131
]
110893681
04121 Ubiquitin system [BR:
han04121
]
110893681
Enzymes [BR:
han01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
110893681
Peptidases and inhibitors [BR:
han01002
]
Metallo peptidases
Family M67
110893681
Membrane trafficking [BR:
han04131
]
Endosome - Lysosome transport
Others
Others
110893681
Ubiquitin system [BR:
han04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
JAMM
110893681
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
JAB
USP8_dimer
Prok-JAB
Motif
Other DBs
NCBI-GeneID:
110893681
NCBI-ProteinID:
XP_021996462
LinkDB
All DBs
Position
12:complement(66328..71693)
Genome browser
AA seq
516 aa
AA seq
DB search
MRSTINVAANTQKINVDNRISLRYYFRIADNILRQAAIFREEKNIIDLYIMLLRFSSLAT
ETIPYHRDYSASLQRDKIYLKKKSLSAITELEELKPAVLQKINDLSRKHAYQSNGWTPQN
KLLEPSKPPPERYPLHQQTSTQSYAGTINKAPTPQVKVHGHVYRDSRNLVYSAPYPLDEQ
TRQLSVNIPRAKEETLSRHSILGPNGLYGQWQPPTINVAVYYPKNVDLTPVEFQSEKKLI
SLEDGVPIERNSSNLEHENSSLETVVSANNNKKPQADEPDLLISFEEKIETPPVPLDIIR
QPSPPPVLAQVHDLVSPSLDTGLTNGSEKPSDGVCSESPLELHISSKVMDHFMKMAKPNT
NKDLETCGILAGSLKNRKFYVTALIIPKQEGTANSCQATNEEEIFEVQDKRSLFPLGWIH
THPTQSCFMSSIDVHTHYAYQIMLPEAIAIVMAPRDSSRNHGIFRLTTPGGMGVIRNCPH
RGFHAHDAPSDGSPIYKQCTDVYINPKLKFDVIDLR
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
atgaggtcaactatcaatgtcgctgccaacacacagaagataaatgttgataatcgaata
tctctgcgttactacttccggatcgccgataacattctgcgacaggctgctatctttcga
gaagagaagaatattatcgatctgtatattatgctcctacgcttttcaagtttggctaca
gaaacaataccatatcatcgggattacagtgcatctcttcagagagataagatctatctc
aaaaagaaatcattgagtgccataactgagctggaagaattaaagcctgctgtacttcaa
aagatcaatgacctatccagaaaacatgcatatcaatcaaatgggtggactcctcaaaat
aaactattggagccatcaaaaccaccaccagagcgatatcctcttcatcagcaaacatcg
actcaaagttatgctggtaccatcaataaggcacctacaccacaagttaaggttcatggg
catgtgtatcgagattctcgcaatttggtgtactcggctccttatccgttggatgagcaa
actaggcaattatctgtaaatattcctcgtgcaaaggaagaaactctctccagacattct
attttgggcccaaatggactttatggacaatggcaaccccctaccatcaatgttgcggtt
tattatccaaagaacgttgatttgacacctgtggaatttcagagtgagaaaaagttgatt
tctttggaggatggtgttccaattgaaagaaatagtagcaacttggaacatgaaaattca
agtttagaaacagttgtttcagcaaacaataacaagaagccacaagctgatgaacccgat
ctcttgatttcttttgaagaaaaaatagagacccctcctgttccgttggatattataaga
cagccttccccacctcctgttctagctcaagtccatgatttggtttccccatcactcgat
accgggctcacgaatggatctgaaaaacccagtgatggcgtgtgctctgaatctcccctt
gagttacacatttcctcaaaagtgatggaccacttcatgaagatggcaaaaccaaataca
aataaagatttagagacatgcggtattcttgctgggtcacttaaaaatcgaaaattttat
gttactgcacttatcattccaaagcaagaaggaacagcaaactcgtgtcaagctaccaac
gaggaggaaatatttgaagtccaggacaaacgatctctattccctcttggatggatacat
acacatcctacgcaatcgtgtttcatgtcatctattgatgttcacacacactacgcatat
cagattatgttgccagaggccattgcaatcgtcatggctccaagagacagttcaagaaat
catggcatttttcgtttgactacaccgggcggtatgggtgtcataagaaactgtcctcac
cggggtttccatgcacatgatgcaccatccgatggcagtccaatttataaacaatgtacg
gatgtttatatcaaccccaagttgaaatttgacgtcattgatttgcgctga
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