Helianthus annuus (common sunflower): 110893899
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Entry
110893899 CDS
T05101
Name
(RefSeq) dicer-like protein 4
KO
K11592
endoribonuclease Dicer [EC:3.1.26.-]
Organism
han
Helianthus annuus (common sunflower)
Brite
KEGG Orthology (KO) [BR:
han00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
han03036
]
110893899
Chromosome and associated proteins [BR:
han03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
110893899
microRNA pathway
RISC loading complex
110893899
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonuclease_3
Ribonucleas_3_3
Dicer_dimer
DEAD
Helicase_C
ResIII
DND1_DSRM
dsrm
Cas3-like_C_2
PAZ
IstB_IS21
Motif
Other DBs
NCBI-GeneID:
110893899
NCBI-ProteinID:
XP_021996745
LinkDB
All DBs
Position
12:6287985..6305370
Genome browser
AA seq
1619 aa
AA seq
DB search
MGNISDEITVARALEALAISHDDEDNDEFHKIEKDPRTIARGYQIELCQKALLENIIVYL
ETGCGKTHIAVLLIYEMICRTKKSKKDICVFLAPTVALVEQQAKVIQASIDVKVGIYCGS
SKNLKGRRDWEKEIEQFEVLVMTPQILLHNLSHCFIRIQHIALLIFDECHYAQAESNHPY
AEIMKIFYKPDVPKLPRIFGMTASPIFGKGASISSLETLLNAKVYTVDTREELDQFVSSP
KVNCYYYGTATHDTPDPHITYLGRLETIKVESMFTLIKNSEDPSILKNTKKALLRLHCNI
EFCLQNLGLWGALQACRILLKGDLVERNAVIEANEQCNDDILCGSYLSKVSAYFASECQK
DYPIEANDTEASLSSLDNLGFPFFSLKLLQLLQILSNFRAQSDMKCIIFVNRIVTARSLA
YILQQVRFLSAWRCSYLVGVHSGLKSMSRKTTNAILEKFRSGELNLLVATKVGEEGLDIQ
TCCLVIRFDLPETVASFIQSRGRARMPQSEYAFLVDSGNPKEMELIKNFHKDEAQMNNEI
SSRKSTSVYNDFEEKTYKVDSTGAIISSGSSVSLLHRYCSKLPHDEFFNPKPLLSYSTHE
ADAVICYIKLPANAPIHQIKSSPQPSREAAKKDACLKACQQLHELGALTHYLLPDDEVDD
ENQDSSDSDCDDDESSRRELHEMLVPSVLQEPWIKGENATLSLNSYFFELNPTPADRLYK
DFGLFLKKPIPQEALRMELDLQLARGRSVLTKIVPCGALEFTDNEILLAERFQEMWLKAI
IDKSEFVTDFVELGKHDFSNSALTFYLMLPVRVDVHRGSMTVDWQLIKKCLSSPIFKNPE
EIITACNQTQTSNTNVCLHLADGPTQIKDIVNSLVYVPCKDTFYFVSAYLPDKDSFSIFK
EGTSYVDHYAEVFGSKFLHPKQPLLKAKQLFRLDNLLRKRGSGEPREKEEHFVELPPEIC
VLKIIGFSRDIGSTLSLLPSIVHRLESFLVAIELRHRLCASFSQGSEVSADRILEALTTE
RCNERFSLERLEVLGDAFLKFAVGRHVFLVNNSLDEGILTRKRSNMVNNSHLLKVALSNN
LHVYIRDQPFEPSHFYPFGRRCTVICTDNTQVEIHSSHESNLKTGENTEVRCNKGHHWIQ
KKTIADIVEALVGAFLVDSGFKAAIAFLKWIGIPVDFTHSQVAEICASSRIFTALSGLID
ISALEDLLGYRFQHKGLLLQALLHPSYHNNYGGCYQRLEFLGDAVLDYLITSYLYSVYPK
LKPGQLTDLRSYSVNNNSFAGIAVNRSFYKYMLCDSTSLTQSMNKYAEFFKTSSSNNVLG
ETVPCPKALGDLVESCVGAILLDSGFNLDVVWKIMISFLDPVMKFSAMQLNPVRELQELC
QFYNWELTFPSVKKDRTFFVDALVNGRGVCESASATNFSKKTAKRIACHKLYLSLKDKGY
KTKVKTLEEILKTSEKMEALLIGNDEIPMDKNILHKYMNADEFESRSQETHSGSVKPVRS
SNGIRRMVDPTPQRSHSDASSSNSQPAAGGDVVHRSSAKSYLYEICAINCWKPPLFECFH
EIGPAHLKQFAFKVSLTIEDASNTVLECIGDHRAKKKDAAEFAAQGAIWYLKQAGHLKN
NT seq
4860 nt
NT seq
+upstream
nt +downstream
nt
atgggcaacatcagcgacgaaattaccgtcgcaagagcccttgaagctctcgcgatcagc
cacgatgatgaagataatgatgaatttcacaaaattgaaaaggatcccagaacaattgca
agagggtaccaaattgagttatgtcaaaaggctttattggagaacatcattgtgtatttg
gaaaccggttgcggtaaaacacacattgcggttttgcttatttatgagatgatatgccga
acgaagaagtccaaaaaggatatatgtgttttccttgctccaaccgtagctctagtcgaa
caacaagctaaggttatacaagcttctatagacgtaaaagttggaatctattgtggtagt
tcaaaaaatttgaagggtcgtcgtgattgggagaaggaaatcgaacaattcgaggtcctt
gtgatgacccctcaaattctgttgcataatttatcgcattgcttcatcaggattcaacat
atcgctcttttgatatttgacgagtgtcattatgcacaagctgaaagcaatcatccgtat
gctgaaattatgaagatattttataaaccggatgttcctaagctcccgcgtatattcggc
atgaccgcatcgccaatatttgggaaaggtgcttccattagtagtctcgagaccttactt
aatgccaaggtttataccgttgacacaagggaggagctagaccaatttgtatcatcccct
aaagttaactgctattattacggtaccgccacacatgatacccctgacccccatataact
tatttagggagacttgaaacaataaaggtcgagagtatgtttacgttgatcaagaatagc
gaggatccttctattcttaaaaacacgaaaaaggccctcctacggcttcattgcaatatc
gagttttgtctccaaaatcttggcctttggggtgcattgcaagcttgtagaattctattg
aaaggcgacctcgttgagagaaatgcggttatcgaggcaaatgagcaatgcaatgacgat
attttatgcggcagttatctatcgaaagtttctgcctactttgcctctgaatgccaaaaa
gattacccgattgaagcaaatgacaccgaagccagtttatcatccctcgataatttgggg
tttccgtttttctcattgaagctgttgcaactcctgcaaattctttccaactttagggca
cagtcggatatgaaatgtattatatttgtgaatagaatcgtaaccgctagatcgttggcg
tatatccttcaacaagttaggtttttgtcggcatggaggtgtagttacttagtaggcgtc
cactctgggctcaagagtatgtcgcgtaaaacgacgaacgccattcttgagaagtttcgt
tcgggtgagctgaatttgttagtagcaacgaaagtgggagaagaaggtctcgatatccaa
acatgctgccttgtaatacgattcgatcttccggaaactgttgccagtttcatacaatca
agaggtcgtgcccgcatgccgcaatctgaatacgcatttttggtggacagtgggaaccca
aaggagatggaattgataaagaattttcataaggacgaagcccagatgaataacgaaata
tcttcaagaaaaagtacgtcggtgtataatgattttgaggagaaaacatataaagtagat
tcaacaggtgccattattagttccggatcgagtgtttcgttacttcatcgatattgctca
aagcttccgcatgatgaattctttaaccctaaaccactactatcttactctacacatgaa
gctgacgccgtaatttgctacataaaacttcccgctaatgctccgattcaccaaatcaaa
agttcgcctcaaccgtcaagggaagcggcaaaaaaagatgcgtgtttgaaagcgtgtcaa
caattgcatgaattgggtgctttgacgcattatctcttacctgacgatgaagttgacgat
gaaaatcaagattcttctgattcagactgtgatgatgatgaaagctcgcgcagagagctt
catgaaatgcttgtaccatccgttcttcaagaaccatggattaaaggggaaaacgcaaca
ctctctcttaactcgtatttcttcgagctcaaccctacgcctgccgatagattatataaa
gattttgggctatttcttaaaaaacctatcccacaagaggcactaagaatggaacttgat
ctccagttagctcgtggtcgatctgtattgactaagatcgtcccctgtggtgctttagaa
tttacggacaatgagattttgctagcggaaaggtttcaagaaatgtggctgaaggcaata
atcgacaagtcagaattcgttacggattttgtcgagttaggcaaacatgatttcagcaat
tcagcgttgactttctacttaatgctacccgtgcgtgtggatgtgcaccgaggatcaatg
actgtagattggcagctcattaaaaaatgtttatcgtcaccgattttcaaaaatccagaa
gaaattattactgcgtgtaatcaaactcaaacgtcaaatacgaatgtttgtttacatctt
gccgatgggcccacacaaatcaaagacatagtgaatagtttggtgtatgttccttgcaag
gatacgttttacttcgtctctgcttatcttccggataaggattcgtttagtatttttaaa
gaaggaacaagctatgtcgatcactacgctgaagtatttggaagcaagtttttgcacccg
aagcagcctcttttaaaagcgaaacaactctttcgtcttgacaacctgctaaggaagaga
ggaagtggagaaccacgtgaaaaggaggagcactttgtcgaactacctcccgaaatatgt
gttctgaaaatcatcggattttcacgggacatcggaagtacattgtcgttattgccctca
atcgtacaccgattagaaagctttcttgttgcaatcgaactgagacacaggttatgcgca
tcattctctcaagggtcagaagtttccgcggatcgcattcttgaagcgcttacgactgag
agatgcaacgaacggttttctcttgagagactagaggttttgggtgacgcgtttcttaaa
tttgcagttggtcgacacgtttttctagtaaataactctcttgatgaaggaatactaact
cggaaacggtcaaacatggtcaacaattcacatttattgaaggtcgcgttatcaaacaac
ttgcatgtatatatacgtgatcaaccgtttgagccttctcatttttacccttttggtcga
cgatgtaccgtgatatgcaccgacaacacacaagttgaaattcattcatcgcacgagagt
aatttaaagacgggtgaaaatacggaagttagatgcaataaaggtcatcattggatacaa
aagaaaaccattgcagacattgtggaagcccttgttggagcgtttttagttgatagcggt
tttaaggcagcaatcgcatttctcaagtggatcgggattcctgttgactttacacactcg
caggttgcggagatatgtgcttcaagccgaatctttaccgctttgagtggtctaattgac
atttctgcccttgaagaccttttgggatatcggtttcaacataaaggtcttcttttacag
gcgctgttacatccgtcttaccataataactatggtggctgttatcagagattggaattt
cttggagacgcggtgttggattacctgattacgtcttatctttattcggtatatccaaaa
ctgaaaccgggtcagttgactgacttaagatcgtattcggtcaacaataattcttttgcg
ggtattgctgtaaatcgatctttctacaagtatatgctgtgtgattccactagtttgacc
cagtcaatgaacaagtatgctgagttctttaaaacctcttcgtcgaacaacgttttgggt
gaaaccgtcccatgtcctaaggctcttggtgatttggtagagtcgtgtgtcggtgccatt
cttcttgattccggattcaatttagacgttgtttggaagataatgatctcgtttttggat
cccgtgatgaaattttcggcaatgcagcttaatcccgttagagaacttcaagaactttgt
cagttttataattgggaattaacgtttccatcggtaaaaaaagataggacatttttcgtt
gacgcgcttgttaacggaagaggagtttgcgagtctgcaagtgctaccaatttcagtaaa
aaaaccgccaagagaatcgcgtgtcataaattgtatttatcattgaaggataaaggttac
aaaacaaaggtgaaaacgttagaggaaatcttgaaaacgagcgaaaagatggaagctcta
ttgatcggaaacgatgaaataccgatggataaaaatattttacataaatatatgaacgct
gatgaattcgaaagtagatcgcaagaaacgcattccggttctgtaaaacctgtgagaagc
agtaacggcattagacgaatggtggatcccacacctcaacgcagtcattcggatgctagt
agtagcaattcacaacccgcagcgggtggtgatgtcgtgcacaggtcatcagcgaaatca
tatttgtatgaaatctgtgcgattaactgttggaaaccaccgttgtttgaatgttttcac
gagatagggccggcccacctcaaacagtttgcgttcaaagtgtctcttacaatcgaagac
gcctcgaatacggttttggaatgcattggagatcatcgggcgaaaaagaaagatgcagcc
gagtttgcggctcaaggagcgatttggtacttaaagcaagcggggcatttaaagaactag
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integrated database retrieval system
