Helianthus annuus (common sunflower): 110893937
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Entry
110893937 CDS
T05101
Name
(RefSeq) protein CHROMATIN REMODELING 5 isoform X1
KO
K11367
chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-]
Organism
han
Helianthus annuus (common sunflower)
Brite
KEGG Orthology (KO) [BR:
han00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
han03021
]
110893937
03036 Chromosome and associated proteins [BR:
han03036
]
110893937
Transcription machinery [BR:
han03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
110893937
Chromosome and associated proteins [BR:
han03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
110893937
SLIK complex
110893937
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_Hrp3
Helicase_C
Chromo
CHD1-like_C
HDA2-3
ResIII
DEAD
Chromo_MIT1
CHDCT2
RPAP1_N
Motif
Other DBs
NCBI-GeneID:
110893937
NCBI-ProteinID:
XP_021996786
LinkDB
All DBs
Position
12:complement(111177372..111193439)
Genome browser
AA seq
1676 aa
AA seq
DB search
MAFFRNYTNATVSDGDLNDKRPGGSIERLENIIGNDDMETTSGMDKGFTTKIKSLNESVA
EDDGNLLNLTTNTTTTMRKTSGKWGSTFWKDCQPMHQGRGSDSGQESKSSSGYNVEDGSC
NDLSEVNKGQNVDEMLSDDYYELDGDEQNDSMHHKLVNNAAGYNSIPQRHVAAHNFLSRN
KSKASFGSEYVQDADFEDDEEEEDEDDPADADFDPDLVTTSVGRGKKVDDEDWDGVDLEE
DDNFEDDEFDISDDDIYKKARGMQRQKRGSKSSREPKPSTFLSRRKRGRTSFDDEEELND
SDDDFEEDFKSTRRKGHPRKDTTKASGRINEVRTSTRSVRKVSYVESDESEEHDEDVKRK
THKDEMEEEDGDSIEKVLWHQPKGMAEEAARTNKSTEPLLLNHLFDTEPDWYDTEFYIKW
KGQSHLHCQWKSFSELQNLSGFKKVINYTKKVMEEIKHRRAVSREEIEVIDVSKEMDLDL
IKQNCQVERIIADRLSKSLEVPEYLVKWQGLSYAEATWEKIDDIAFAQAAIDEYKTREAA
LAAAQGKMVDFQRRKSKASLRKLDEQPDWLKGGKLRDYQLEGLNFLVNSWRNDTNVILAD
EMGLGKTVQSVSMLGFLQNSQQIHGPFLVVVPLSTLSNWAKEFRKWLPDMNMIVYVGTRA
SREVCQQYEFFSDKNTGGTTKFDALLTTYEVLLKDKTVLSTIKWNYLMVDEAHRLKNSEA
SLYTTLKEFRTKNKLLITGTPLQNSVEELWALLHFLDSDKFNSKDEFVQNYKNLSSFNEN
ELANLHMELRPHILRRVIKDVEKSLPPKIERVLRVEMSPLQKQYYKWILERNFHDLNKGV
RGNQVSLLNIVVELKKCCNHPFLFESADHGYGGDSGITGSSKLERVILSSGKLVILDKLL
DRLHETNHRVLIFSQMVKMLDILADYLSIKGFKYQRLDGSTKSEVRHQAMEHFNAPGSDD
FCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMSRAHRIGQQEVVNIYRFVTSKS
VEEDILERAKKKMVLDHLVIQKLNAEGRLEKKEAKKGSGFDKNELSAILRFGAEELFKED
RNDEENKKRLLSMDIDEILERAEKVEQKGAEGEPGNELLSAFKVANFCSAEDDGTFWSRW
IKPEAIAHADEALAPRAARNSKSYAEVIPPERNNKRKKKGIEFQDKGMKRRKADYSSYQT
PAIEGASAQARGWSYGTLPKRDATRFFRAVKKFGNDSQISLIATEVGGCVEAAPVEAQVE
LFDALLDGCREAVNAGSLDAKGPMLDFFGVPVKADDLLNRVEELQLLGKRINRYNDPISQ
FQALMYLKPATWSKGCGWNQKDDARLLLGIHYHGFGNWEKIRMDEKLGLLKKIAPVELQH
HETFLPRAPQLKERASQLLEMELASVGGKSFGNKGGRKGSKRQQKDHPPNNPTFRGKGKQ
VKPGGSPVTNGKSKMTRGKKKEALVKEEGEMSDTEEVYEQFKEVKWMEWCEDVLTQEKKT
LERLHRLQTTSADLPKEKVLSRIRNYLQLLGRKIDQIVTDHEQDPYKQERMTTRLWNYVS
TFSNLSGGKLQQIYSKLKQENEVAAGVGTSHINAGGSRNQSSSALLNNNKGGLDTAKFEA
WKRRRRAESDPNTTAHLQQRPSFSSPDPGLGILGPAPSHNSRPTRQSAFGPKQGFT
NT seq
5031 nt
NT seq
+upstream
nt +downstream
nt
atggcgttttttagaaactatacaaatgcaacagtttcagatggtgatttgaatgacaag
aggccaggtggaagtatagagagactcgagaacatcataggaaacgatgatatggaaaca
acttcgggtatggataaagggtttacgacaaagattaagtcactaaatgagtcagtggct
gaggatgacggtaacttattgaatttaacgactaatactactactactatgaggaaaaca
tctgggaaatggggttcgacattttggaaggactgtcaaccaatgcatcaagggcgtggg
tctgactcagggcaggaatcgaaaagtagttctggttataacgttgaagatggatcatgc
aatgatttgtcagaagtaaataaaggtcaaaatgttgatgagatgttgtctgatgattat
tacgagctggatggagatgagcaaaatgattcgatgcaccacaagttagtaaacaatgca
gctggttataattcaataccacagcggcatgttgccgcacataactttttgtctagaaac
aagtcaaaagcttcttttgggagtgagtatgtccaggatgctgattttgaagatgatgag
gaggaagaagatgaagatgaccctgcagatgcagattttgaccctgatctagttacaaca
agtgttggaagagggaagaaggtagatgatgaagactgggacggtgtggatttagaggaa
gatgataactttgaggatgacgaatttgacatctcagacgacgatatttataagaaagca
agaggcatgcaaaggcagaagcgtggttcaaagtctagtagagaacctaaaccgtcaaca
tttttgagtcggaggaagagaggtagaacatcatttgatgatgaagaagaattaaatgat
tcagatgatgatttcgaagaggacttcaaaagtacaaggagaaaaggtcatcctcgcaaa
gacactacaaaagcttctgggaggatcaatgaagttagaacttcaaccagatctgtgcgc
aaagtatcgtatgttgaaagtgacgagagcgaagagcatgatgaagatgtcaagagaaag
acccacaaggatgagatggaagaggaagatggtgactccattgagaaggtgctctggcac
cagccaaagggcatggcagaagaagctgcgcggaccaacaaatctacggagcctctattg
ttgaaccatttatttgacacagagccagattggtatgatactgaattctatatcaaatgg
aaaggccaatcacatttgcattgtcaatggaaatcattttctgaactacaaaatctgagt
ggctttaagaaggttataaactacactaaaaaagttatggaggaaataaagcataggaga
gcggtatctcgtgaggagattgaggttattgatgtgagcaaggagatggatttggatctt
atcaagcagaattgtcaggtcgaaagaataattgctgatagacttagcaaaagcttggaa
gtgccagagtatttggttaagtggcaaggactctcttacgccgaagccacatgggagaag
attgatgatattgcttttgcacaagcagcaattgatgaatataagactagagaagctgcg
cttgcagctgcacaaggaaaaatggtagatttccagcgaagaaagagtaaagcaagtttg
agaaaacttgatgaacaacctgattggttaaaaggcgggaaactgagagactatcaactt
gagggattgaattttcttgttaatagttggagaaacgatacaaatgttatattagctgat
gaaatgggtcttggaaaaactgttcagtcggtttctatgcttggttttctccagaactca
caacaaattcatgggccttttcttgttgttgttcctctatcaactctgtcaaattgggct
aaagagttcagaaagtggcttcctgatatgaacatgattgtatatgttgggactcgtgca
agtcgagaggtttgtcagcaatatgaatttttctctgataagaacactggtggcactacg
aaatttgatgcactattgactacctatgaagttttactaaaggacaagacagtgctatca
acaattaagtggaattatcttatggttgatgaagcacataggttaaaaaacagtgaagca
tcattatatacaacactcaaggaattcagaacgaaaaacaagcttcttattactggcact
cccctgcaaaatagtgtggaagaactatgggcgttgcttcactttcttgactcagataaa
ttcaacagcaaggatgaatttgttcagaattacaagaaccttagttcatttaatgaaaat
gagcttgctaaccttcatatggagttacggcctcacattttgcgaagagttataaaggat
gtggagaaatcattgcccccaaagattgagcgtgttcttcgggttgagatgtctcctcta
cagaagcagtattacaagtggattttggaacgcaattttcatgacttgaacaaaggtgta
cgtggaaatcaggtttcccttttaaacattgtggttgagttgaagaaatgttgtaatcat
ccattcctttttgagagtgctgatcatggttacggtggggactctggaattactggtagc
agtaaactggagcgggtaattcttagtagtggaaagctagttatcctagataagcttctt
gacaggctgcatgagaccaatcatcgtgttctaatattttcacagatggttaagatgttg
gatatattagcagattacttgtcaattaagggattcaagtatcagagactcgatggaagt
acaaagtctgaggtgcgtcaccaagctatggagcattttaatgcaccaggcagtgatgat
ttctgcttccttctttctactcgtgctggtggtttaggaatcaaccttgcaaccgcagat
acagtcatcatatttgactcggactggaatcctcaaaatgatctgcaggcaatgagcaga
gctcatagaatcggacaacaggaggttgttaatatatataggtttgtgacaagcaagagt
gttgaggaagacatcttggaacgtgcaaaaaagaagatggtactcgaccatttggttatt
cagaaactaaatgctgaaggaaggttggagaagaaagaagcaaaaaaagggagtggtttt
gacaagaatgagttatcagctattttgagatttggggcagaggaactgttcaaggaagat
agaaatgatgaagaaaacaaaaagcgtcttctaagcatggatattgatgaaattcttgaa
agagcagagaaggttgaacagaaaggagctgaaggagaacctggaaatgaattgctgagt
gcatttaaggttgcaaatttctgctctgctgaggatgatggaactttctggagtcgttgg
ataaaacctgaagccattgcacatgctgatgaagctttagctccacgggctgcaaggaac
agcaagagttatgctgaggtcatcccacctgaaagaaataacaaaaggaaaaagaagggt
attgaatttcaagacaaaggtatgaagcgtcgaaaggctgattattcaagttatcaaact
ccagcaattgagggagcctctgcccaagcaaggggttggtcatatggtaccttgcctaag
agagatgccacacgtttttttcgtgcggttaagaagtttggaaacgacagccaaattagc
ttaatagcaactgaggttggtggttgtgtcgaagctgctccagtagaggcacaggtggag
ctttttgatgcattactagatggttgtagagaagcggttaatgcaggaagtctggatgcc
aaggggccaatgttggatttttttggtgttcctgtaaaggctgatgacctcttaaaccgt
gttgaagaacttcaactccttggaaagcgcattaaccgatacaatgatccaatctcacag
tttcaggctttgatgtacctcaaacctgcaacttggtctaaaggttgtgggtggaaccag
aaggatgacgcgaggttgctactagggatccattatcatggatttgggaactgggaaaag
ataaggatggatgaaaagctcggtcttttgaagaagattgctccagttgagcttcagcat
catgaaacattcctgccacgagctcctcagttgaaagaacgcgcctctcaacttcttgaa
atggaacttgcgtctgttggtggtaagagttttgggaacaaagggggtcggaagggttct
aaaaggcagcagaaggatcatccacccaacaatcctactttccgtgggaaaggcaaacag
gtgaaaccaggtggatctcctgtcacaaacggtaaatcgaagatgacacgtgggaagaag
aaagaggctttggttaaagaggaaggtgagatgtcggacactgaagaagtttatgaacag
tttaaggaagtgaaatggatggaatggtgtgaagatgtcttgactcaagagaaaaagaca
cttgagcgccttcacaggttacagacgaccagtgccgatcttcctaaagaaaaggttctt
tctagaatcagaaattatctacagcttcttgggcgaaagattgatcagattgtcaccgac
catgagcaggatccgtacaagcaagagaggatgacaacacggctgtggaattacgtctca
accttttcaaacttatcgggtggtaaacttcaacagatatattccaaactcaagcaagaa
aacgaggttgcagccggagtgggtacttcccatatcaacgcaggaggttctagaaatcaa
tcatcatctgcattacttaacaacaacaaaggtggccttgatacagcaaaatttgaagca
tggaaaaggaggcgacgggctgaatctgacccgaatacaactgcccatttacaacaacga
ccatccttcagctcgcctgacccgggtttgggaattcttggacccgcgccatctcacaat
agtagacccacacgccagtctgcttttggtccaaaacaaggtttcacatga
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integrated database retrieval system
