Helianthus annuus (common sunflower): 110894321
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Entry
110894321 CDS
T05101
Name
(RefSeq) protein ESSENTIAL FOR POTEXVIRUS ACCUMULATION 1 isoform X1
KO
K18730
PERQ amino acid-rich with GYF domain-containing protein
Organism
han
Helianthus annuus (common sunflower)
Brite
KEGG Orthology (KO) [BR:
han00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
han03019
]
110894321
Messenger RNA biogenesis [BR:
han03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
110894321
Surveillance factors
Other surveillance factors
110894321
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GYF
Motif
Other DBs
NCBI-GeneID:
110894321
NCBI-ProteinID:
XP_021997224
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All DBs
Position
12:complement(17869946..17884009)
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AA seq
1267 aa
AA seq
DB search
MSEANSKLHLPDDLVSSKLTADSWTPRVEASGGNEEDKMIGLLDDSKDHAGLDSSIPLSP
QWLYAKPNETKMEMRAPSSLSLGVDFNVKERRPDVTDDKKDWRKVPNDTASALRWREEER
ETGLLGRRDRRKTDNRRVDVGRETTDTRGSPPDRWHDAGKTNPGLEARRDSKWSSRWGPD
EKDKEPRPEKRTNVEKEDNHNHNETQTHSTTPRLTSERDPEPRDKWRPRHRMEANSTGPG
SFRAAPGFGLEKGRADGSTTGFTIGRGRSSGPIENNDSVPGKPGVSAGVFLYPRGKLLDI
YRTQKLDPFFANMPDEIMQVSPITQVTAVEPLAFIAPDKDEESILNDIWTGKVTSSEVSN
NSFPKVRSSESITDAGKDGNLFSVEELVDPNKLINLTDADSTVLLKGPKRNLDGGQKFSE
IESYEEKTRSKSGIIDSNLDNNSNLKVTDSAYVKHQLFEDVINTEHPNDSNLLFAMSSSE
QYWAGNTQQPMKSSSINKHLASVVPPEELSLLYCDPQGEIQGPFLGVDIISWFEQGFFGA
ELPVRVADAPEGTLFEALGDVMPHLKGAHSYTTEHDVAVLAPVSEADVLTDDRRWQLTGN
NGLATKSYSESQGFIEEDIVFPGRPEHYVNNHTAHTEPQASSQNDNKMHPFGLLWSELEG
SSLRNDQPSKTPFTGGNTFSESNLYQDAMSASNMNKEANHFDLAEKLRSQHIQQQLLQQH
NLLSSSHLNEQRLTGQDLDHVWALQLQQQQLQQQQLQQQQQQLQLQQQQQQQQQQRQIQL
QKLQQQMLLKEQQSRQQMLLEQLVHNQRSHTDSLRSHNVHDQMLLKQQQILSEMQQREHL
IQAKYGHQGHTNDLMEMMMHAKHGSVSSLENELLQHERLRQLGLRQRVEMEEERQIGSDW
FHRVNSPGLIERNLLMQEQIQRGIYEQRSLSMPGGGAGMNPLVSNSFRRSHGDVMEEQMS
NEWMESRIQQLHINNEIQKRDMEARRSSEGQSQWMSGGTSDDNSKRLLMELLHQKPSNQP
IEVLDTNSGLNQNHPFGVGSYGLNSGVRVDDTVVGFKVNEESLNPISMMNGLGAETQESM
VTQQGGVTAVDHRHNSLGIGGLYMDNTGVGLPDFFALDAEDRAAATSKRPENILLKRPPV
ARAALSHEALSELASKSDVRGRSVPTIISPEGGRREAGGSAANQAIDDVRFRRTSSWSDA
DVSETASFSDMLKSNNTKKADVESADGQGGKVGKKKGKKGRQIDPALLGFKVTSNRIMMG
EIQRIED
NT seq
3804 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaagctaacagtaagcttcatcttcctgacgatctcgtttcctccaaactcact
gccgattcctggactcctagagtggaagcttcaggagggaatgaagaggataagatgata
ggtttgctagatgattctaaagatcatgcgggtctggacagcagcatccccttgtctcct
cagtggctgtatgctaaaccaaatgagactaagatggaaatgcgtgcaccgagttctctt
tctcttggagttgatttcaatgtgaaggaacggcgtcctgatgtcaccgatgacaaaaaa
gattggagaaaagttccaaatgacacagcaagtgcacttcgttggcgggaagaagaaaga
gaaacaggcttactcggtagaagagaccgccggaaaaccgataaccgacgtgttgatgtt
ggtagagagactaccgataccagaggttcgcctcctgacaggtggcatgatgctgggaaa
actaatcctggtctcgaggctaggcgtgatagcaaatggtcatctaggtggggcccagat
gaaaaagacaaggaaccccgacccgaaaagcgaacaaatgttgaaaaagaagataaccat
aaccataacgaaactcaaacacattcaaccaccccaagattaacatctgagcgtgatcca
gaaccccgtgataaatggaggccccgccacaggatggaggcaaattctaccggaccgggt
tcatttcgggctgcacctggattcgggctagagaaaggacgggctgacggttcaaccacc
ggctttacgattggacgtggcaggtctagtggacccattgagaataatgatagtgtacct
ggcaagcccggtgtttctgctggcgtgtttctttatccaaggggaaaacttcttgatata
taccgtacacaaaaacttgacccgttttttgctaacatgcctgacgaaatcatgcaagtt
tctccaataacacaagtgactgctgtcgaaccgcttgcttttattgctcctgataaagat
gaagagtctattcttaatgatatatggacgggaaaagtcaccagtagtgaggtgtcaaac
aattcatttccaaaggtcaggtcatctgagagtattacagatgctggaaaagatggtaat
ctcttctcggtggaggaacttgttgatccaaataagctgattaatctaacagatgctgat
agtactgtacttttgaaaggtcctaaaagaaacttagatgggggacaaaaattttcagaa
atagaatcatatgaagagaaaacaaggtcaaagagtggaatcattgacagcaatcttgat
aataattcaaatcttaaagttactgattcagcttacgtgaagcatcagttgtttgaggat
gtcatcaataccgaacatcctaatgattcaaacttgctctttgccatgtcatcatctgag
caatattgggctggaaatacgcagcagcccatgaagagtagtagtattaataaacatttg
gcgagtgttgtaccacctgaggagttaagtttgctttattgtgacccgcaaggtgagatc
cagggtccgtttcttggggttgacatcatatcgtggtttgaacaagggttttttggcgcg
gaattacccgttcgagtggcagatgcaccagaaggaacgcttttcgaggcgttaggagat
gttatgccacatctaaaaggtgcacatagttacaccactgaacatgacgtggcggtgttg
gctcctgtgtctgaagctgatgttttgacggatgatcgtcgttggcaattgaccggtaat
aatggtttagccacaaagtcatactctgaaagtcaaggcttcattgaagaagatattgtt
ttcccaggaaggcctgaacattacgtgaacaaccacactgctcataccgaacctcaagca
tcaagccagaatgataataagatgcacccgtttgggttgttgtggtctgagcttgaaggg
tcaagtttaaggaacgatcagccatctaaaacgccgtttactggtggtaatacgttttct
gaaagtaacttgtatcaagatgccatgtcagcatccaacatgaataaagaggcaaatcac
tttgatttagcggaaaaacttaggtctcagcacatccaacaacagctacttcagcagcat
aatctgttatcttcttctcacttgaatgaacaacggttgactggtcaagatcttgaccac
gtttgggcacttcagttgcaacaacagcaactgcaacaacagcaactgcaacagcagcag
caacaactgcaactgcaacagcagcagcagcagcaacaacaacagaggcagattcagctt
caaaaacttcaacaacaaatgttgcttaaagagcaacagtctagacaacaaatgctgctt
gaacaattggtacacaatcagaggtcacacacggattcgttaaggtcgcataatgtacac
gatcaaatgcttctgaagcagcagcagattttaagtgaaatgcaacaacgtgagcatttg
attcaagcgaaatacggccatcaagggcacacgaacgatcttatggagatgatgatgcat
gctaagcatgggtcggtgtcatcgttagaaaacgagttgcttcaacatgagcgattgaga
cagttggggttacgacagagagttgaaatggaggaagaaagacaaatcggttctgactgg
tttcaccgagtcaactcacctggactcattgaacggaaccttttgatgcaggaacagatt
caacgcggtatttatgaacaacggtcattgtcaatgccaggtggcggagcgggaatgaat
cctttggtctctaatagtttccgtcgctcacatggggatgtaatggaagaacaaatgtcg
aatgagtggatggaatcacggattcaacaattgcatattaataatgaaatacagaaacga
gatatggaagcgaggaggagttcggaaggtcaaagtcaatggatgtctggtgggaccagc
gatgataattcgaaaagactgcttatggaactactacatcaaaaaccatccaatcaacct
attgaagtgttggatacaaatagtggactgaaccagaaccacccatttggtgttggatct
tatggcttgaattctggtgtgcgtgttgatgatacggtagtgggctttaaagtcaatgaa
gagagcctgaacccgataagtatgatgaatggtttgggtgcagaaactcaagaaagcatg
gtgactcagcagggtggtgttactgctgtagatcacaggcataactcacttggaattggt
ggcttatacatggacaatactggagttggacttcctgacttttttgcattagacgctgaa
gatcgggcggcagctacatccaaaaggcccgagaacattttattgaaacgtccacccgtc
gcacgcgcagccttgtcacatgaagcgttatctgagctggcatcaaaatcagatgtcaga
ggaaggagtgtccctactattatatctcctgaaggtggtagacgggaagcagggggcagt
gcagcaaatcaagccatcgacgatgttcgttttagaagaacgtcatcatggagtgacgct
gacgtgtcagagacagcgtcttttagtgacatgcttaaaagcaataatactaaaaaagcg
gatgtagaaagtgcagatggacaagggggtaaagttggaaagaaaaaaggaaaaaaaggg
aggcaaatcgatcccgctcttttaggatttaaggttactagtaaccgaataatgatgggc
gagattcaacgtatagaagattaa
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