Helianthus annuus (common sunflower): 110894392
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Entry
110894392 CDS
T05101
Name
(RefSeq) nuclear pore complex protein NUP155-like
KO
K14312
nuclear pore complex protein Nup155
Organism
han
Helianthus annuus (common sunflower)
Pathway
han03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
han00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
110894392
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
han03019
]
110894392
Messenger RNA biogenesis [BR:
han03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
110894392
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nucleoporin_C
Nucleoporin_N
Motif
Other DBs
NCBI-GeneID:
110894392
NCBI-ProteinID:
XP_021997316
LinkDB
All DBs
Position
12:23260598..23271833
Genome browser
AA seq
1423 aa
AA seq
DB search
MTKMSLENDIVMRDIMKASVVVSDRIGRDVSAQLDLEEALEASRYISHPYSTHPSEWPPL
VEVVNSRELPSVLIERYNAAGGEGTALCGIFPEIRRAWASVDNSLFLWRFDKWDGQCSEY
SDDEQAICAVGLVKPKPEIFLEAIQYLLVLATPVELLLVGVCCSGSGDGSDPYSEVSLQP
LPDYTIPSDGVTMTCIACTNTGRIFLAGRDGHIYEMRYTTGSGWYKKSRKVCLTAGLGSI
VSRWVVPNVFNFGAVDPVVEMVVDNERHILYARTEEMRIQVYSLGFNGDGPLKKVTEEKN
IINQSDLNSGSRQAAGSRPSTRSTKTSIVSISSLSTVESKWLHLVAVLSDGRRMYLSTTK
SSGNSGTLSNNVRKPSCLKVVTTRPAPPLGVGGGLSIGPLSFAGRSQNEALSLKIESAHY
SPAALVLSGSSLLLVNRDSTTHSSSSSSILGTGVRSSKALRECVSSIPIEGRTLAVAEVL
PPRDTASSVQSLYSQLEFIGYDNFGESVEKLAGKLRARGDLPTQHILPRRRIIIFSTTGM
TEVAFNRPVDILRRLLESNTPRTILDDFFNQFGPCEAAAMCLMLAARIVNTESFINSIVA
EKAAEAFEDPRVVGIPVFSGSGALANTRSASSGFSMGQVVQEAEPVFSGAHEGLCLCTSR
LLLPVWEFPVMSSSDAKNENGIVGCRLSVEAMQVLEDKLRSLEKFLRSRSQRRGLYGSIL
NETGADMMSSDTSMARNVFSPSRNLESSDAGASNKRQRLPYSTAELASMEVRAMECVRQL
LLRCGEALFLLQLLSRHHVTRLVQSFDSNTKQSLLQLTFHQLVCSKDGDRLATRLVSALM
EYYTGPDGRGTVDDISGRLREGCRSFYKESDYKFYLAVECLERAAAATNNDERETLAREA
FSKLTGVPESADLQAVCKRFEDLRFYEAVVRLPLQKASALDSAGDTLNEQIEAGARAHAL
AQRERCYDIIITALRSLKGEEVSHKEFRSPIRSSAQSSLNPATRKKYICQVIQLGVQSSD
KIFHEYLYRALIDIGLEDELLEFGGPDLVPFLQNAMQTKYTELLARYYVLKQQHVLAAHV
LLRLAERRSNGLENFLTLDQRRQYLNNAVIQAKSASESDGLPNSVRDSGLLDLLEGKLTV
LQFQIRIKEELESVVCKLESAPDNSEAEFLQTVKEKVKELSLDLKSITQLYNEYAVPFEL
WEICLEMLYFASYSGDTDSSIVRDTWARFTDHALSKGGIAEACSALTRIGSHVYSGDDAV
LPLDTLCLHLEKAALDQMVSGAETVGDEDVARALLAACKGSVELVLNTYDQLLTTAAVLL
SPTLKLRLLRSVLVVLGEWAGSVSACRMGSSPIGASLVLRGTFSLDQRTAINHGIRDKIT
SAANRYMTEVTRLALPQSQTESVYSGFKELELSLSTSFSYDRF
NT seq
4272 nt
NT seq
+upstream
nt +downstream
nt
atgacgaagatgtcgttggaaaacgacatcgtaatgcgcgatatcatgaaagcaagtgtc
gtagtgagcgatcgtattggtagagatgtttcagcgcagcttgacctagaagaagctcta
gaagcttctagatatattagtcatccgtactctactcatcctagtgagtggcctccgttg
gttgaagtggtaaatagcagggaattgccctcagtactcatagaacgatataacgctgct
ggaggtgaaggcactgctttatgtggaatatttcctgaaattcgtagagcatgggcatct
gtcgataattctttatttctttggcgctttgataaatgggatggtcaatgctctgaatac
agcgatgacgaacaggctatatgtgctgtcggtttggtcaaacccaagcccgaaattttt
ctcgaggctattcaatatcttttagttttagcaactcctgttgagttgcttctcgttgga
gtatgttgctccggaagtggtgatggatcagacccgtattctgaagtttcgttacagcca
ttacccgactacacaataccatctgatggggttacaatgacatgtattgcatgtacaaat
acaggtcgtattttcttggcgggtcgtgatggacatatttatgagatgcgttatactacc
ggttcgggttggtacaaaaaaagtcgtaaagtttgtttgactgcaggccttggtagtatt
gtttcaaggtgggtggtaccaaatgtattcaactttggggctgtggaccccgttgttgaa
atggttgttgataacgagaggcacattttatatgcgcggaccgaagaaatgagaatccaa
gtttactcgttaggttttaacggtgatggaccacttaaaaaggtgacagaggagaagaat
ataatcaatcagagtgacctaaatagtggcagcagacaggcggcaggatcacggccttcc
actagatcaacgaaaacttcgatagtttctatatcttctttatctacagtagagtcaaaa
tggctacatcttgtagcagttttatcagacggtagaagaatgtatctttcaactacaaaa
tccagcggaaacagtggcacgcttagtaataatgttcgaaaaccaagttgtttaaaggtt
gtcacaacccgacccgcacctccattgggggtgggtggcgggttatcaatcgggccactc
tcgtttgcgggtcgatcacaaaatgaagctctttcgttgaagatcgaatcagcgcattac
tcacctgcagcactcgttctttctggttcatcacttctgcttgtgaatcgggattcaact
acgcactcatcatcctcctccagtattttagggacaggtgtcaggagctcaaaggcatta
cgagaatgtgtttcttccataccgattgaaggccgaacactggctgtagctgaagtccta
ccgccacgtgatacagcttcatccgtgcaatcactatattcacaactagagtttattgga
tacgataatttcggggaatccgttgaaaagttggctgggaagttacgggctagaggtgat
ttgccaactcagcatatactgccacgcaggcggattatcattttcagcacaacggggatg
acggaagtcgctttcaatcgacctgtcgacattttaagaaggctgcttgagtcaaacaca
ccaagaacaatactcgacgatttttttaatcaatttgggccctgtgaggctgctgccatg
tgtctaatgctggctgcacggattgttaacacggaaagtttcataaatagtattgttgct
gagaaggcggctgaagcctttgaggacccacgggtcgtgggtatacctgttttttcaggt
agtggtgcattggctaacacccgatctgcatccagtgggtttagcatgggtcaagtggtt
caagaggccgagcctgttttttcgggtgcacatgaagggctatgtttgtgtacgtcacgg
ttgcttttgcctgtttgggagtttcctgttatgagttcttctgatgctaaaaacgaaaat
ggaatagttgggtgcagactttctgtcgaagcaatgcaagttctagaagataaacttcgg
tctctagagaaatttttacgatctaggagtcaaagaagagggctttatggttctattctt
aatgagacaggtgctgatatgatgagtagtgatacgagtatggcaaggaacgtttttagt
ccttctcggaatttagagtctagtgatgcaggggcatctaataaacggcaacggcttcca
tacagcactgcagaattggcttccatggaggtgagggctatggagtgtgtgaggcagctg
cttcttagatgtggtgaagctctatttctcctccagcttctttcccgacatcatgtgact
cggttggttcaatcctttgactcaaacacgaagcagtcgttattacagttgacttttcac
cagctagtttgttccaaagatggtgatcgactcgctacaagacttgtatctgccctaatg
gagtattacacaggtccagatggcagaggaacggttgatgatatcagtggtaggttacgt
gaaggttgtcgaagcttttataaagaatctgattacaaattttacttggctgttgaatgt
ctcgagagagctgctgctgctactaacaatgatgagagagaaacacttgctagagaagcc
tttagtaaactgaccggtgttcccgagtctgcagatctccaagctgtgtgcaaacgcttt
gaggacttgagattttacgaagctgtggttcgtttgccactacagaaggcaagtgcgtta
gactctgcaggggacactctcaatgaacaaatagaggctggagctcgggcccacgcactt
gctcagagagaacgttgctacgacatcatcataactgctttaaggtctttaaaaggtgaa
gaagtttcacacaaagaatttcggtcacccatcagatcatcagcacaatcttctcttaat
cccgctaccaggaagaaatacatatgccaggtcatccaactcggtgtgcagtcatctgat
aaaatctttcatgagtatctgtaccgagccttgatcgatatcgggcttgaggatgaacta
ctggagtttggggggcccgatttagtaccgtttttacagaatgcaatgcaaacaaaatac
actgagcttttagcacgatactatgtgctaaaacagcagcatgttcttgcagcacatgta
ctattacggttggcagaaaggcgatccaacggtttggaaaatttcctcacacttgatcaa
aggcgccaatatctaaacaacgcggttattcaggcaaaaagtgctagtgaaagtgatggg
ttaccgaattctgttagagacagtggcctacttgatttgcttgagggaaaactaaccgtt
ttgcagtttcaaattagaatcaaagaggaattggagagtgtagtttgtaaattagagtcg
gccccagataattctgaggctgaatttctacaaactgtgaaggaaaaagtgaaggagtta
tcgctggatttgaagagcatcacacaattatacaatgaatatgctgttccatttgaactt
tgggagatatgtttagaaatgctatattttgcaagctactctggtgataccgatagcagc
attgtaagagacacgtgggcccgatttacggatcatgctctctcaaagggtggcattgcg
gaagcttgttcggctctaacgagaatcggttcacatgtttattctggagatgatgctgtt
ttacctttagatacattatgtttacatcttgaaaaggctgcattggatcagatggtttca
ggggctgaaactgttggtgatgaagatgttgcacgggctcttttggcagcttgcaagggg
tcggtagaactggttctgaacacgtatgatcagttattaactactgctgcggtcttgctg
tcaccaaccctgaaactaaggctcttgcggtctgtactagtagtgcttggggaatgggcc
gggtctgtttctgcttgccgaatgggctcaagcccaattggggcttcacttgttctccga
ggaacgttttcacttgatcaaagaactgctattaaccatgggattcgtgataagataaca
agcgcagcaaacaggtatatgactgaggtaacgagattggcattgccacagagccaaaca
gaaagtgtttacagtggttttaaagagcttgaattatctctttcaacttcgttttcttac
gatcgattttga
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