Helianthus annuus (common sunflower): 110894946
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Entry
110894946 CDS
T05101
Name
(RefSeq) pre-mRNA-splicing factor CWC22 homolog
KO
K13100
pre-mRNA-splicing factor CWC22
Organism
han
Helianthus annuus (common sunflower)
Brite
KEGG Orthology (KO) [BR:
han00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
han03041
]
110894946
Spliceosome [BR:
han03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
110894946
Complex C
U4/U6.U5 tri-SnRNP related factors
110894946
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Gene cluster
GFIT
Motif
Pfam:
MA3
MIF4G
Motif
Other DBs
NCBI-GeneID:
110894946
NCBI-ProteinID:
XP_021997893
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All DBs
Position
12:51690890..51697999
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AA seq
945 aa
AA seq
DB search
MEQQRDRSDDEDKYRRRRDGDRRGRDRDRSDTEKVTDRRDRYRNRSDDEDGNDRRRRDRN
RDRDRRNGDEYVSNKGGARKTSDDEEYDDETRRGRSRVLKGDDEYRDSKRNEDRRRRSRS
VEDNGDGRSNMKTSEDGKRRKEVAKKHEENSDGEDGEIRKTEIKGKREDISDDEDGEIRK
RGTKGKDRSDDEDDRKDRSRRDVRKSRSDEEDDKYKRRRDEEESDDEAGEIRKRGTKGKD
RSDDEDDRKDRRRRDMRKSKSDEEDDKYKRRRDEEESDDEDRKIRKRGRKGKDRRSDDED
DRKDRRRRDRYKNRSDDEDDKYKNRRDSKRDRRRGDDVANKKNDKNGETENVDEGPRFQK
LAEMQENMTNLGKTGGVYIPPFKLARMMSGVQDKSSMEYQRMTWDALRKSINGLVNKVNA
TNIKNIIPELFAENLIRGRGLFCRSCMKSQMASPGFTDVFAALVAVVNTKFPEVGDLLLR
RIILQLQRAYKRNDKHQLLAAVKFIAHLVNQQVVHELIALELLTLLLENPTDDSVEVAVG
FVTECGSILQDLSPKGLHGIFERFRGILHEGEIDKRVQFLIEGLFALRKAKFQGHAAVRP
ELDLVELEDQLTHEVSLLDKIDPEISLDIFKMDPDFLENEKRYEDLKKTILGDESSDEDD
DKGGEESDDDDEDESSEEEDEEQMRIRDETETNLVNLRRTIYLTIMSSVDFEEAGHKLLK
IKLEPGQEMELCIMLLECCSQERTYLRYYGLLGQRFCMINKVHQENFEKCFVQQYSMIHR
LETNKLRNVAKFFAHLLGTDALPWHVLAYIRLTEEDTTSSSRIFIKILFQELSEHLGIRL
LNERLSDPSMQADFESIFPRDNPKNTRFSINFFTSIGLGGITENLREYLKNMPRLIMQQK
PASESDDSGSSSSGSESSSSEESESSSESSDSERDQKSSKRRRRR
NT seq
2838 nt
NT seq
+upstream
nt +downstream
nt
atggagcagcaaagagacaggagcgatgatgaagataaatacagaagaagaagagacggt
gataggcggggccgagatagggacagatctgataccgaaaaggttaccgataggagagat
agatacaggaacagaagtgacgatgaagatggtaacgataggagaagaagagacaggaat
agggatagggataggaggaacggtgatgaatatgttagtaataagggcggagctcgaaaa
acaagtgatgacgaagagtatgatgacgagaccagaagaggtcggagcagggttttaaag
ggtgatgacgaatatcgtgatagtaagaggaacgaagataggaggagaagaagtaggagc
gttgaagataatggtgatggcagaagcaacatgaaaacgagcgaagacggtaaaagacgt
aaagaggttgctaaaaagcacgaggagaatagtgatggtgaagatggtgaaattagaaag
acggagataaaaggaaagcgtgaggatataagtgatgatgaagacggtgaaattaggaaa
cgagggacaaaaggtaaggatagaagtgacgatgaagatgaccgtaaagacaggagtagg
agggacgtgcgtaagagtaggagtgatgaagaggatgataaatacaagaggagaagagat
gaggaggagagtgatgacgaggcaggtgaaattaggaaacgagggacaaaaggtaaggat
agaagtgacgatgaagatgaccgtaaagacaggaggagaagggacatgcgtaagagtaag
agtgatgaagaggatgataaatacaagaggagaagagacgaggaggagagtgatgacgag
gatcgtaaaattaggaagaggggacgaaagggtaaggatagaagaagcgatgacgaggat
gatcgtaaagaccggaggagacgcgatcggtataagaacaggagtgatgatgaggatgat
aagtataagaacagaagagatagtaagagggataggagaagaggtgatgatgtggcaaat
aaaaagaacgataaaaacggggaaactgagaatgtggacgaaggtccacgattccaaaag
ctggccgaaatgcaagaaaacatgaccaatttaggtaaaaccggcggggtgtatattcca
ccgtttaagttagcccgtatgatgagtggagtccaagataaaagcagcatggaatatcaa
aggatgacatgggatgcgttaaggaagagtataaacgggttggtcaacaaggtcaatgca
acaaacatcaagaatatcatccccgagttgtttgctgaaaatttgattaggggaagaggt
ctcttttgtcggtcctgtatgaagtcacaaatggcctctcctggtttcacagacgtgttt
gcagcactcgttgcggttgtcaataccaaatttcccgaagtcggtgatcttctgctgaga
aggattattttgcagcttcaaagggcgtataagcgcaatgacaagcatcaattgcttgca
gcggttaagtttatagctcatttggtgaaccagcaggtagttcatgaacttattgctctt
gaactactgacgcttctattagaaaatccgactgatgatagtgtggaggttgctgttggt
tttgttactgaatgcggatcgatacttcaggatctatctccaaaagggttgcatggtatt
tttgagcgttttcgtggaattcttcacgagggagagatagataaaagggtgcagttcttg
attgaaggtctctttgcacttcgaaaagccaagtttcagggccatgcagctgtacgtcca
gagttggatcttgttgagctggaagatcaattaacacatgaagtatcccttcttgataag
atcgacccagagattagtcttgatattttcaagatggatcctgattttctcgagaacgaa
aagcgctacgaagatttgaagaaaacaattctcggtgacgaatcttcagatgaagatgat
gataaaggcggtgaggagtctgatgatgatgacgaggatgaatcgtcagaagaagaggat
gaagagcaaatgaggatacgagatgaaaccgaaacaaatctcgttaaccttcgaagaacc
atatacttaacaattatgtctagtgttgattttgaggaagccggtcataaacttctcaaa
atcaaactcgagccaggacaggagatggaactgtgcattatgttgttggagtgttgcagt
caggagagaacttatctccgttactacgggcttttgggccagaggttttgcatgatcaac
aaagttcatcaagaaaatttcgagaaatgttttgtgcagcagtactcaatgattcatcga
ctcgagacaaataagctgcgtaatgtagccaagtttttcgcacatctactcgggaccgat
gctctgccttggcacgttttggcttatattcggttgaccgaggaggacacgacttcctcg
tccagaatttttatcaaaattctcttccaggagttgtccgaacatcttggcattcgtctc
ttgaacgagcgcctcagtgatccgagcatgcaggccgatttcgaatctattttcccgcga
gacaaccctaaaaacactcgattctcaattaacttctttacatcaatcgggcttggtgga
attactgaaaacttgagagagtacctgaagaacatgcctcgtcttattatgcaacagaag
cctgcttctgaatcagacgattctggttcttccagctcgggatctgaatcgtcaagctcc
gaggaaagtgagagttcaagtgaaagcagtgacagtgaacgtgatcagaagagcagcaag
cgccgaagacgacgttag
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