Helianthus annuus (common sunflower): 110895032
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Entry
110895032 CDS
T05101
Name
(RefSeq) probable CCR4-associated factor 1 homolog 9
KO
K12581
CCR4-NOT transcription complex subunit 7/8
Organism
han
Helianthus annuus (common sunflower)
Pathway
han03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
han00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
110895032
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
han03019
]
110895032
Messenger RNA biogenesis [BR:
han03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
110895032
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
110895032
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CAF1
DUF4857
Motif
Other DBs
NCBI-GeneID:
110895032
NCBI-ProteinID:
XP_021997982
LinkDB
All DBs
Position
12:58800902..58803228
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AA seq
276 aa
AA seq
DB search
MSVCIDETITIRNVWSKNLESEFEFIRSVIDQYPYISMDTEFPGVIYRHLDPKKTNAHRQ
PLDHYKLLKSNVDVLNLIQLGLTLTDASGNLPCDDVTRCRFIWQFNFSDFDLTRDQHAPE
SIELLKRQGIDFERNRVEGIESERFAELMMSSGLICNDSVSWVTFHSAYDFGYLLKILTR
QELPRGLDEFLESLRVFFGENVYDVKHLMKFCRKNLYGGLDRVANILEVNRVVGKCHQAG
SDSLLTWHAFQKMRDVYFVDVGPEIFAGVLYGLEVY
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atgtcagtttgtatagatgaaaccatcacgatccgaaacgtatggtccaaaaatctagaa
tccgaattcgaattcatccgatccgtgatcgatcagtacccgtacatctcaatggacact
gaattccccggtgtcatctaccgtcacttagatccgaaaaaaacaaacgctcatcgccag
ccgttagatcattacaagcttcttaaatcaaacgtcgacgttttgaacctcatccagctc
ggtttaacactcactgatgcgtctggtaacctcccgtgcgacgacgtcacgcgctgtcgt
ttcatttggcagtttaattttagcgattttgacttgacgcgtgaccaacacgcgcctgaa
tcgattgagttgttgaagcgtcaagggatcgatttcgaacggaaccgagttgaaggtata
gagtcggagcgattcgctgagttgatgatgtcgtctgggctgatttgtaatgactcagtg
agttgggttacgtttcacagcgcgtatgattttggttacttgttgaagattctcacgcgc
caggagttgccgcgtgggttagatgagtttttggagagtttgagggtgttttttggggag
aacgtgtacgatgtgaagcatctgatgaagttttgtcggaaaaatttgtatggtgggtta
gaccgggtggcgaatattttggaagtgaaccgggttgtgggaaagtgtcatcaggccggt
tcggatagtttgttgacgtggcacgcgtttcagaagatgagagacgtgtattttgttgat
gttgggccggaaatctttgccggtgttttgtatgggttggaagtttattag
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