Helianthus annuus (common sunflower): 110895065
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Entry
110895065 CDS
T05101
Name
(RefSeq) probable pectate lyase 5
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
han
Helianthus annuus (common sunflower)
Pathway
han00040
Pentose and glucuronate interconversions
han01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
han00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
110895065
Enzymes [BR:
han01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
110895065
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GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
VWC2L_C
Motif
Other DBs
NCBI-GeneID:
110895065
NCBI-ProteinID:
XP_021998021
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Position
12:60169403..60171580
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AA seq
402 aa
AA seq
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MGLIIFFVLILALLAPISTLSSPLQDPNLVVQHVHRSINESRRNLGFLSCGTGNPIDDCW
RCDKSWEKHRQRLADCAIGFGKHAIGGRDGKIYVVTDSKNDDPVNPKPGTLRYGVIQKEP
LWIIFAHDMTIKLKEELMMNSFKTIDGRGANVHIAGGPCITIQYVTNIIIHGVNIHDCKQ
GGNADVRDSPDHYGWRTTSDGDGISIFGGSHVWVDHCSLANCHDGLIDAIHGSTAITISN
NYMTRHDKVMLLGHSDSLTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWE
MYAIGGSASPTINSQGNRFLAPNSHDSKEVTKREEASENEWKHWNWRSEGDLMLNGAYFT
PSGTGASKSYAKASSLSARSSSIVGSITANAGVLRCRKGSRC
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atggggttgataatcttttttgttctcattcttgctcttcttgcccctatttccacttta
tcttcacctttacaagatcctaatcttgtagtacaacatgttcataggagtataaacgaa
tctaggaggaatctgggatttttatcatgtgggacaggaaatccaattgacgattgttgg
cgatgcgataagagttgggaaaagcaccgtcaacggttagctgactgtgcaatcgggttt
ggaaaacacgcgattgggggacgtgatggtaaaatatacgttgtgacagactctaaaaat
gatgatcctgttaaccctaaaccaggaactttaagatatggtgtgattcaaaaagaaccc
ttatggatcatatttgcacatgacatgactattaagcttaaagaagaactcatgatgaac
tcattcaagaccatcgatggtcgtggtgccaatgttcatatagcaggtggcccgtgcatc
accatccaatatgtcacaaacataatcatacatggtgtcaacatacatgattgtaagcaa
ggtgggaatgccgatgttcgggactcgccagaccattatgggtggcgaacgacttcggat
ggtgatgggatttccatatttggtgggagtcatgtatgggtggatcattgttcattggct
aactgtcacgatgggttgatagatgccatacatggatctacagccatcacgatatccaat
aactacatgacacgtcatgataaagtcatgttattggggcatagtgatagtttaactcaa
gacaaaaatatgcaagttacaattgcatttaaccattttggtgaaggtcttgtacaaagg
atgccaagatgtaggcatggatatttccatgtggtaaacaatgactacactcattgggaa
atgtatgcaattggaggaagtgcttcaccaaccatcaatagccaagggaatagattccta
gctcctaattctcatgatagcaaagaagtgacaaaacgagaggaggcatccgagaacgag
tggaaacattggaattggcgttcagaaggtgacttaatgttaaatggtgcatatttcaca
ccatcgggtacaggtgcgtccaagagttatgcaaaggcatcgagtttgagtgcaagatca
tcttctattgtgggctcgatcacggctaatgctggcgtgctccggtgccggaaaggctct
aggtgttag
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