Helianthus annuus (common sunflower): 110895904 Help Entry 110895904         CDS       T05101                                  Name (RefSeq) THO complex subunit 2   KO K12879   THO complex subunit 2 Organism han  Helianthus annuus (common sunflower) Pathway han03013   Nucleocytoplasmic transport han03040   Spliceosome Brite KEGG Orthology (KO) [BR:han00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     110895904   09122 Translation    03013 Nucleocytoplasmic transport     110895904  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:han03019]     110895904    03041 Spliceosome [BR:han03041]     110895904 Messenger RNA biogenesis [BR:han03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     TREX complex      110895904 Spliceosome [BR:han03041]  Complex C   Other components    EJC/TREX     110895904  Other splicing related proteins   Spliceosome associated proteins (SAPs)    TREX complex     110895904 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Tho2 THOC2_N Thoc2 LIM_bind FapA Motif Other DBs NCBI-GeneID:  110895904 NCBI-ProteinID:  XP_021998981 LinkDB All DBs Position 12:complement(129607053..129624083) Genome browser AA seq 1737 aa AA seqDB search MSLPALECKYVTDECIREWKNGSSTFKPPAPAPVLRYLYELCWNIVRGELPIQKCKSALE LVEFSDRVSDDEVASNLADIVSQMAQDLTMPGEYRARLIKLAKWMVEHSVVPLRLFHERC EEEFLWDSEMIKIKAADLKSKEVRVNTRLLYQQTKFNLLREESEGYAKLVTLLCGSEVCS PNASAATVGIIKSLIGHFNLDPNRVFDIVLECFELQPDNNVFLNLIPIFPKSNASQILGF KFQYYHRTEVNNTVPFGLYQLTALLVKKEFLDLDSIYAHLLPEDNDAFDHYNEFSAKRLD EANKIGKINLAATGKDLMDDEKQGDVTVDLFAALDMESEAVTERSSELENSQTLGLLIGF LFVDDWYHANILFRRLAPLNPVEHIRICDGLFRLIDKTISPAYELVRQRQLQSTDSDSME TDINFTKKSFINLPKELFEMLTSVGPYLHRDTLLLQKVCRVLRGYYLSAVRSVNSGDDLN LSENRTPRLHLKDARLNLEEALGACLLPSLQLIPANPAVGQEIWAVLSLLPYEARYRLYG EWEKDDECNPMVLSAKQTAKLDTRRILKRLAKENLKQLGRMVAKLAHANPMTVLRTIVHQ IEAYRDMIAPVVDAFKYLTQLEYDILEYVVIERLVQGGREKLKDDGLNLSDWLQSLASFW GHLCKKYPSMELRGLFQYLVNQLKKGSGIELVLLQELIQQMANVQYTENMTEEQLDAMAG SETLRYQATSFGATRNNKALIKSTNRLRDSLLPKDEPKLAIPLLLLIAQHRSVVVIEADS PHIKMVCEQLDRCHGSLLQYVEFLCGAMTSVNSYAQLVPDLHDLIHLYHLEPEVAFLIYR PVMRLFRCQTTSDVFWPLDCDESSSSSAQGKEGGLILDIGPPRKPVTWSDLLETVRTVLP AKAWNSLSPDLYATFWGLTLYDLYVPRNRYESEIAKQHAALKALEELSDNSNSAITKRKK DKEKIQESLDKLTSELQKHEENVASVRRRLAREKDNWLSSCPDTLKINMEFLQRCIFPRC TFSMPDAVYCAMFVHTLHSLGTPFFNTVNHIDVLICKTLQPMICCCTEYEVGRLGRFLFE TLKTAYYWKSDESIYERECGNMPGFAVYYRYPNSQRVTYSQFIKVHWKWSQRITRLLIQC LESTEYMEIRNALILLTKVSNVFPVTRKSGINLEKRVAKLKSDEREDLKVLATGVAAALA ARKPSWVTEEEFGMGYLDLKPAPVASKSVYVTPATINASQSETANGRTTSVQHHDSGTSN TSRTKPSEGKHDKGKGGSLSNGSDLLAGPPRSAESQKQIDDSENPAKGPAAKRSVSTASV PKQPKQDAVKTETKPKLGGPVHEVFALAKGSSSRSSDPETGVLKLAESRKDDSSEPMDVQ RRTSSRPTHSPRPENSYASKSNDKPTKRTSPAEEQDRFNKRRKGEHDLRDVEPEVRFSDR ERASEDEPVRVSDKQLDKPKVERYDREHRERYHGDDVMEKLRDRSMERYSRERSVDRDSD KGSKDDRNKGRYNDNPADKDDRFRGQSLPPPPPLLPHVVPQSVNANRRDEDSDRRFGTAR HSQRLSPRHDDRERRRSEENMLLSQEDAKRRREEEIRERKREEREAFSNKMDERERDMER EKVNATKEELDVNASKRRKLKREQHMASEPGEYSPAASASAPAPPLHINMTSSYDVTRDR GDRKAPVPRNVYMEEPTRMHAKDVPTKMTRRDSDPMYDREWEEEKRQRVEPKRRHRK NT seq 5214 nt NT seq  +upstreamnt  +downstreamnt atgtctcttccagcgttagagtgtaaatacgtcaccgatgaatgtattcgtgaatggaag aacggcagcagcaccttcaaaccaccggcaccggcgccagttcttcgctatttgtacgag ctttgttggaacatagttagaggagagttgccgattcagaagtgtaaatcagcattggag ttggttgagttttcagatagggtttctgatgatgaagtggcttctaatttagctgatatt gtttctcaaatggctcaagatcttacaatgcctggagaatatcgtgctcgtcttattaaa ttggcaaagtggatggtggaacattctgtggtccctttgagactgttccatgaacggtgt gaggaagaatttctatgggattcagagatgattaagataaaggctgctgatttgaagtca aaagaggttagggttaacactcgtcttctttatcaacaaactaaattcaaccttcttcga gaagaaagcgaaggctatgccaagctggttacccttctatgtggttcagaagtttgctct ccaaatgcatcagcagcaacagtcggcataattaagtcgttgattggacacttcaatttg gatccaaaccgtgtcttcgacattgtattggagtgttttgaacttcagccagataacaat gtcttcttgaacctgattcctattttccccaagtctaatgcttcacaaattcttggtttc aagtttcaatattatcaccgtacagaagtaaataatacggtaccttttgggctctatcag cttacagcactactggtcaagaaggagtttttagatcttgatagcatatatgcacatctt cttcctgaggacaatgacgcctttgatcattataatgaattttctgcaaaacgacttgat gaggctaataagattggtaaaataaatcttgctgctactggaaaggatcttatggatgat gaaaaacaaggagacgtgacggtagatctttttgctgctttagatatggaaagtgaagca gttacagagcgctcttcagaacttgaaaacagtcaaactttaggcctgctcataggtttt ctttttgtggatgactggtatcatgcaaatatcctattccgccgtctcgcgccactaaat ccagttgaacatattcggatttgtgatggtttgtttaggctcattgataaaacaatttct cctgcttatgaacttgttcgtcagcgacagcttcaatctaccgattctgattcaatggag acagatattaacttcacgaaaaaatcatttattaatctcccaaaagaattattcgagatg cttacttctgttgggccctatcttcatcgtgatacattactactgcagaaggtatgcaga gtgctgagaggttattacctttctgcagtcagaagtgtcaattctggtgatgacttgaat ttgagtgaaaatcgaactcctcggctccacctaaaggacgctaggttaaaccttgaggaa gcacttggtgcatgtctacttccgtcacttcagttaataccagcaaatccagctgttgga caggagatttgggctgtactgagtctacttccttacgaggcgaggtatcgtttatatggg gaatgggaaaaggatgacgagtgcaaccccatggttctatctgcaaagcagacagcaaag ctggacaccagaaggatcctgaaacggcttgcaaaggaaaacttaaagcagcttggacgg atggttgcaaagttagctcacgcaaatcccatgactgtgcttcgaaccatagttcaccag atagaggcatatagggatatgattgctccagttgtagatgcattcaaatatttgacacag cttgagtatgatattttggaatatgttgtcattgaacgactggtacaaggtggtcgtgaa aagctaaaagatgacggtctaaacttatcagactggcttcaatctctggcgtcattttgg ggtcatttgtgtaaaaagtacccatcaatggaactcaggggtctattccagtatctagta aatcagctgaaaaaagggagtgggattgaacttgttctcttgcaggaacttatccagcaa atggctaatgttcagtatacagagaacatgactgaagagcagttggatgctatggcagga agcgagactctacgatatcaggctacttcttttggtgccacccgtaacaataaggcttta atcaaatccaccaacagacttcgagattcattgctcccaaaggatgagcccaagctcgca attccacttttgctacttattgctcagcatcgttctgtggttgtcattgaggccgattct cctcacattaagatggtctgtgaacagttggatagatgtcacggatcccttctgcaatat gtcgaatttttatgtggtgcaatgacatcagtaaactcatatgctcagttggttccagat ctacatgatctcatacatttataccaccttgaacctgaggttgcattcttaatttatcga cctgtgatgaggctcttcagatgtcagactacatccgatgttttttggccgttagattgt gatgaaagttcaagtagttcagctcaagggaaggagggtggacttatactcgatattggt cctcctcgcaaacccgtaacgtggtcagatcttctggagacagttagaacagtgttaccg gcaaaagcttggaacagtctctcgcctgatctgtacgctacgttttgggggctaacactt tatgatctttatgtaccgagaaatcgttacgagtctgagatagccaaacagcatgctgct cttaaagcattagaagaactttctgataattccaattcagcaatcaccaaacgaaagaaa gataaagaaaagatccaagaatctctagataagttaactagtgaactccagaaacatgaa gaaaacgttgcgtctgtgcgtagacgtttggcccgtgagaaagataattggttgagttca tgccctgatacattgaagattaacatggagttccttcaacggtgcatatttcctagatgt acattcagcatgcctgatgctgtttattgtgctatgtttgttcatacccttcattcactt ggcaccccttttttcaacacggtcaaccatattgatgttcttatatgtaaaacattacaa ccaatgatatgctgttgcacggagtacgaggtgggccgccttggtagatttctctttgag actctcaagactgcctattattggaagagtgacgaatctatatatgaacgtgaatgtgga aacatgccaggatttgctgtctattatagatacccaaatagccagcgtgtcacatatagc caatttatcaaggtgcactggaaatggagtcagagaatcacaagattgttgatccagtgc ttggaatctacagaatacatggaaattagaaacgctcttattttgcttacaaaagtttca aatgtttttcccgttactaggaaaagcgggatcaaccttgagaaaagggttgctaaactt aagagtgatgaaagagaagatttaaaggtgttggctactggtgttgctgcagcattggct gctcgaaagccttcatgggtcacagaagaagaattcggaatgggttatcttgatttgaag cctgcaccagtagcttcaaaatccgtttatgttactccagcaactattaacgcttctcaa agtgaaactgcaaatggaagaaccacttcagttcaacatcatgattccgggacttctaac acatcaagaacaaaaccttcagaaggtaaacatgataaaggaaaaggcggttcactaagt aacggttcagatttgttagctggaccacccagatcagccgaaagtcaaaagcagattgat gattccgagaatccagcaaaaggtcctgctgcgaagagatcagtttctactgcgtctgta ccaaagcaaccaaaacaggatgctgtgaaaacggaaactaaacctaagcttggtgggccc gttcatgaggttttcgcactagcaaaaggatcatcctctagatcatcagatcccgagact ggagttttgaaattggctgaatcgagaaaagacgattcatcagaacccatggatgttcaa agacgaacctcatcccgaccgactcattccccaaggcctgaaaattcttacgcctcaaaa agtaatgataaaccgacgaagagaacaagccccgctgaagaacaggaccggtttaacaag aggcgaaaaggggaacatgatttgagagacgtcgagcccgaggtgcggttttcagataga gagagagcaagtgaggatgagccagtaagagttagtgataagcagttggataaaccgaaa gttgaaagatatgatcgggagcacagagaaagatatcatggagatgatgtgatggaaaag ttaagagaccggtcaatggaaagatacagtagagagaggtcggttgatagggattctgat aaaggtagtaaagatgacagaaataaagggcgctacaatgataatcctgctgacaaggat gatcggtttcgtggtcagagtttaccaccgcctccccctctgctgccacacgttgttcct caatccgtaaatgcaaatagaagagatgaagattctgaccggagattcggaaccgctaga cattcacaaaggttgtctccaagacatgatgacagagaacgcagacggtctgaggaaaat atgttgctttctcaagaagacgcaaagagaagacgagaagaagaaatccgagagaggaaa cgagaagaacgcgaagcattctcaaacaagatggatgagagagaaagagatatggagaga gaaaaagttaacgcaacgaaggaagagctggatgtgaacgcctcaaaaaggcgaaaactt aaaagagagcagcatatggcttcggagcctggtgaatattcaccagcagcttcagcttca gctccagctcctccgcttcatattaacatgacatcatcatatgatgtcacgagagatagg ggggaccgaaaagcacccgttccacgtaacgtttacatggaagaacctacccgtatgcac gcgaaagatgtgcccactaagatgacccgtcgtgactctgacccaatgtatgacagagaa tgggaagaagaaaaacgacagagggttgaaccaaagagaaggcaccgcaaataa

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