Helianthus annuus (common sunflower): 110896139
Help
Entry
110896139 CDS
T05101
Name
(RefSeq) BRCA1-associated RING domain protein 1
KO
K10683
BRCA1-associated RING domain protein 1
Organism
han
Helianthus annuus (common sunflower)
Pathway
han03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
han00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
110896139
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
han03019
]
110896139
04121 Ubiquitin system [BR:
han04121
]
110896139
03036 Chromosome and associated proteins [BR:
han03036
]
110896139
03400 DNA repair and recombination proteins [BR:
han03400
]
110896139
Messenger RNA biogenesis [BR:
han03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
110896139
Ubiquitin system [BR:
han04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
110896139
Chromosome and associated proteins [BR:
han03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
110896139
DNA repair and recombination proteins [BR:
han03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
110896139
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCT
BRCT_2
zf-HC5HC2H
zf-HC5HC2H_2
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_4
zf-C3HC4_3
RTT107_BRCT_5
PHD_NSD
zf-C3HC4_2
zf-RING_5
zf-RING_6
LIG3_BRCT
PTCB-BRCT
zf-RING_2
Motif
Other DBs
NCBI-GeneID:
110896139
NCBI-ProteinID:
XP_021999276
LinkDB
All DBs
Position
7:134180001..134186927
Genome browser
AA seq
671 aa
AA seq
DB search
MEEAQRLINPWVLHLQKLGLELKCPICLQLFNRPVLLPCSHIFCSSCQIGMECAVCKHSY
IDREVKPAPFMENIVSIYRNLEATFTITSHVIHPVCSDIGKASVQDVNNSLKKENGVITK
EGNSSNDQSTTLQTAVPDLTFGSLETLEKCITPESVKKQEFKASGSSSKVQVAHDKHVET
RVDGVGFIPMEQLSPPLSCSDPNSNHEDSVRYSLKRPAEKDASGAKSNNHEGKRQKETDD
RSDDMKTERNVHLETNLSSENVATASCNSETESKKPVSGGQTDQMDLKSNPCAFCQCSKI
SEGSGALMAYAHGKEVKGNVSNFAKVTYVHEKCTEWAPQIYFHKGTVKNLESEVARASKL
KCTSCGKKGAVLGCYVKSCQRTYHVPCAYDIPDCRWDCIDFLLLCPNHVSHKFPKEKKSK
AKKQVTEKTISTNVNRCTTLQDGGKNLVLCGSALSAEQKFMMVDFARTNGALVLKYWRDN
VTHVIAATDANGACTRTLKVLMAILNGKWVVTMEWLKACVDAGRVVNEEPYEVRLDTHGC
SGGPTAGRLRALNNAPKLFNNTKFYFVGDFVQAFKSDLINLVKTAGGTISETKDQLLSSD
HGGVGLDHATYVVYNADLSICAVVENEDSIKAQRLAAAEGVAQECGSRVVGHTWILESIA
ACSLLPLTSRV
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
atggaagaagctcaaagattgatcaacccatgggttcttcacctccaaaaactcggtctt
gagctcaaatgccccatttgtcttcagttgtttaatcggccggttttgctcccttgcagt
cacattttctgcagttcgtgtcagattgggatggagtgtgcagtttgtaaacattcgtac
attgatcgagaggtaaagcctgcacctttcatggaaaacattgtgagcatctatagaaat
cttgaagctaccttcacaatcacttcacatgttattcatcctgtttgttcagatataggc
aaggcatctgtacaagatgttaataacagtttaaaaaaggagaatggtgtgataacaaaa
gagggaaattctagtaatgaccaatctacaactttacaaactgctgtgcccgatttaacg
tttggttctcttgaaacgttggaaaaatgcatcacaccggaaagcgttaagaaacaagag
tttaaggcaagtggttcaagttctaaggtgcaggtagctcatgataagcacgtggagact
cgtgttgatggggtcggttttattccgatggaacaacttagccctccattatcttgcagt
gatccaaacagtaaccatgaggattcggtacggtattcactaaaaagaccagctgaaaaa
gatgcttctggagctaaaagtaacaatcatgaaggcaaaagacaaaaggaaacagatgac
agatcagacgatatgaagacggaaagaaatgtgcatcttgagaccaatttgtcgtctgaa
aatgtcgctactgcgagttgtaactcagagaccgagtctaaaaaaccagtttccggcggg
cagacggatcaaatggatttgaaaagtaacccttgtgcattttgccagtgttctaagatt
tcagaaggaagtggagcgttgatggcatacgcccacgggaaggaagtaaaggggaacgtg
tctaacttcgcgaaggttacgtatgttcatgaaaaatgcaccgaatgggctcctcagatt
tacttccataaaggaacagtcaagaatttagagtcggaagtcgcaagggcaagcaagcta
aaatgcaccagctgtggtaaaaagggagccgttctcgggtgctacgtgaaatcatgccaa
cgaacttaccatgtgccgtgtgcatacgacatccctgattgcagatgggattgtattgac
ttcttgttgctgtgtcccaaccatgtttctcacaaatttccgaaagaaaaaaagtcgaaa
gccaagaaacaagtcaccgaaaaaacaatttctacaaatgtgaatcgttgcacaacgttg
caagacggtggaaagaatttggtgttatgtggttcagctctttctgcggaacaaaagttt
atgatggttgactttgcaagaactaacggagcgttagtgttaaagtactggagagataac
gtcacacatgtgattgccgccacagatgcaaatggcgcatgcacaagaacattgaaagtt
ctcatggctattttgaacggaaaatgggttgttacaatggaatggttaaaggcgtgtgta
gatgctggacgtgttgtgaacgaagaaccatacgaagtacgtttagatacacatggttgt
tccggagggcccacagcagggaggctaagagctctaaacaatgctccgaaacttttcaac
aacacgaagttttattttgttggcgatttcgttcaagctttcaagagcgatctcataaac
ttggtaaagactgccgggggcacaatcagtgagacgaaggatcaattgttatcgagtgat
catggaggcgttggattagatcacgcaacttatgttgtttacaatgctgacctgtcgatt
tgcgctgtggtggagaatgaggattccatcaaagctcaaagattggctgcggcggaaggg
gtagcgcaagaatgcgggtcgcgggttgttgggcatacatggattttggaatcaattgct
gcatgtagcttgctgcctcttacatcaagggtgtaa
DBGET
integrated database retrieval system
