Helianthus annuus (common sunflower): 110897542
Help
Entry
110897542 CDS
T05101
Name
(RefSeq) E3 ubiquitin-protein ligase SINAT2
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
han
Helianthus annuus (common sunflower)
Pathway
han04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
han00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
110897542
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
han04121
]
110897542
Enzymes [BR:
han01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
110897542
Ubiquitin system [BR:
han04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
110897542
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
Beta-prop_NOL10_N
YpzI
Motif
Other DBs
NCBI-GeneID:
110897542
NCBI-ProteinID:
XP_021999991
LinkDB
All DBs
Position
13:complement(23764496..23769689)
Genome browser
AA seq
302 aa
AA seq
DB search
MAPGGGVCKDVIESHPKFLKYDVATTKTDKSVTRIAAGKHGMQSPNGVHELLECPVCTTL
MYPPIHQCPNGHTLCSNCKLRVHNCCPTCRLEMGNIRCLALEKVAESLELPCRHQDLGCH
DIFPYYSKLKHEQNCRFRPYNCPYAGSECSITGDIPFLMTHLKDDHNVDMHDGCTFNHRY
VKSNPHEVENATWMLTVFNCYGRQFCLHFEAFQLGMAPFYISFLRFMGEDTEAKKFSYSL
EVGGYGRKFTWQGVPRSIRDSHRKVRDSQDGLVIPRNLALFFSGGDRQELKLRVSGRIWK
EQ
NT seq
909 nt
NT seq
+upstream
nt +downstream
nt
atggcgccaggtggcggtgtgtgtaaagatgttattgagtctcaccctaaatttttgaag
tatgatgtggcaacaacaaaaaccgataaaagtgttacaagaatagcagctggaaaacat
ggaatgcaatcgccaaatggtgttcatgagcttctagaatgtcctgtttgcacaacgtta
atgtatcctccaattcaccagtgtccaaatggccacactttatgttcaaattgcaagctt
cgagtgcacaattgttgtccaacatgccgtctcgaaatgggaaacataaggtgtttagcg
ttggaaaaagtagccgaatcgttagaacttccgtgtagacatcaagatcttggatgccat
gatatctttccttattacagcaagcttaaacacgagcaaaattgccgatttcgcccctat
aactgtccttatgcagggtctgagtgttcaatcactggagatatcccgtttcttatgacc
catttgaaggatgatcataacgttgatatgcatgatggatgcactttcaaccatcgatat
gttaaatctaatccgcatgaagtcgaaaacgccacatggatgctaacggtattcaactgc
tacggaagacaattctgtttgcatttcgaggcgtttcagcttggaatggcacctttttac
atatcattcctgcggttcatgggtgaggatacggaagccaaaaagtttagctattcatta
gaagtgggagggtacggtcgtaaattcacatggcaaggggtcccgcgaagcattcgcgac
agtcacagaaaagttcgtgatagtcaagatggactagtgattccgagaaacttagctttg
tttttctcaggtggagataggcaagaactcaagttaagggttagcggacgtatatggaaa
gaacagtga
DBGET
integrated database retrieval system
