KEGG   Helianthus annuus (common sunflower): 110897550
Entry
110897550         CDS       T05101                                 
Name
(RefSeq) UBP1-associated protein 2A
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
han  Helianthus annuus (common sunflower)
Pathway
han03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:han00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    110897550
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:han03019]
    110897550
   03041 Spliceosome [BR:han03041]
    110897550
Messenger RNA biogenesis [BR:han03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     110897550
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     110897550
Spliceosome [BR:han03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    110897550
SSDB
Motif
Pfam: RRM_1 RRM_7 RRM_Nup35 Cut8 DDRGK
Other DBs
NCBI-GeneID: 110897550
NCBI-ProteinID: XP_022000003
LinkDB
Position
12:109760549..109764372
AA seq 444 aa
MAKKRKARATQPAAAEQPPPTEQQEIHERQQELEPPGGMELEQTPDEQEPEEEDPQEDEE
QEEEEEEEESDEEADVKVEANGEQTEDLDDEPLEKLLEPFSKEQLVLLLKEAVSKHPEFI
ESVQKIADADPAHRKIFVHGLGWDTTSEVLISEFGKYGEIEDCKHVVDKVSGKSKGYAFL
LFKHRAGAQKALKDPQKKIGNRITSCQLASAGPVPAPPPNAPPVSELTQRKIFVSNVAAD
IDPQKLLEFFSKFGEIDDGPLGLDKQTGKPRGFALFVYKSLEGAKKALEEPHKIFEGHTL
HCQKAVDGPKPSKPFFQHQQYGGGGGHHHPAKKSKYSGSGGGGGHGSHGHLMAPSGPSVG
YNPGVPPLNPALGQALTALLATQGGGLGNLLGLGGAPQGMPPAGYGNQAGASYGAQPGMQ
GGYPNQQGGQGGNRQQQGGGPYGH
NT seq 1335 nt   +upstreamnt  +downstreamnt
atggctaaaaagcgaaaggctcgtgctacacaacctgccgctgctgaacaaccacctcct
acggaacaacaggagattcacgaacgacaacaggaactcgagcctcccggagggatggag
ctagagcaaacacccgacgaacaagagccggaggaagaagacccacaggaagatgaagaa
caagaagaagaagaagaagaggaagaaagcgacgaagaagccgacgtcaaagtcgaagcc
aacggagaacaaacagaggatttggacgatgaacctctagagaagcttctagaaccgttt
tccaaagaacaattagttttattgctcaaggaggctgtttcgaagcaccctgagtttatc
gaaagtgttcagaaaatcgccgatgcggatccggctcacaggaagatatttgttcacggt
ctagggtgggataccacttctgaggtcttgattagtgagtttggaaagtatggtgagatt
gaggattgtaagcatgtggtcgataaggtatccggtaaatcgaaaggttatgcgttttta
ctctttaaacatagggctggggcgcagaaggccttgaaggaccctcagaagaagattggg
aatagaataacttcctgtcagctggcttctgctggcccggttccagcgcctcctccgaat
gcgcctccggtttcggagctaacgcagaggaagatatttgtgagtaatgtggctgcggat
attgatccgcagaagcttttggagttcttttccaagtttggggagattgatgatgggccg
ttgggtttagataagcagactgggaagcctagagggtttgcgctgtttgtgtataagagt
ttggagggtgcgaaaaaggcgttggaagagccgcataagatttttgaagggcacacttta
cattgccagaaggctgttgatggtcccaagcccagcaagcctttttttcagcatcaacag
tatggtggtggtggtgggcatcatcaccctgcgaagaagagcaagtattcgggctcgggt
ggtggtggaggacatggaagtcatggtcatttgatggcaccctctggaccctcggtgggt
tacaacccgggtgttcctccgttgaatcctgctttgggtcaggctttgacagcgcttctt
gcaactcagggaggtggacttgggaatcttttaggacttggtggggctccacaggggatg
ccgcctgccgggtatggaaatcaagctggtgcaagctatggtgctcaaccggggatgcag
ggtggctacccgaatcaacagggtggtcaaggaggtaacaggcagcagcaaggtggtgga
ccttatggtcactag

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