Helianthus annuus (common sunflower): 110898000
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Entry
110898000 CDS
T05101
Name
(RefSeq) probable CCR4-associated factor 1 homolog 10
KO
K12581
CCR4-NOT transcription complex subunit 7/8
Organism
han
Helianthus annuus (common sunflower)
Pathway
han03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
han00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
110898000
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
han03019
]
110898000
Messenger RNA biogenesis [BR:
han03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
110898000
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
110898000
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CAF1
Motif
Other DBs
NCBI-GeneID:
110898000
NCBI-ProteinID:
XP_022000429
LinkDB
All DBs
Position
13:66082473..66083987
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AA seq
272 aa
AA seq
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MSDVLKSESVHIREVWNDNLEEEFALIREIVDDYPFIAMDTEFPGVVLRPLAQFKNINDY
NYVTLKDNVDMLKLIQLGLTFSDEDGNLPTCGTDKPCIWQFNFREFNVNEDIFANDSIEM
LRQCGIDFKKNSEMGIDANRFGELLMSSGVVLNDNICWVTFHSGYDFGYLLKLLTRKELP
KSQAGFFELIKIYFPIIYDIKHLMRFCNHLHGGLNKLAEILDVERIGVCHQAGSDSLLTS
HAFKKLKEGYFNGNTEKYAGVLYGLGVEDGDK
NT seq
819 nt
NT seq
+upstream
nt +downstream
nt
atgtctgatgttctgaaaagtgagtctgttcatatcagagaggtatggaatgataatctt
gaagaagagtttgctttgattcgagaaattgttgatgattacccttttattgcaatggat
accgagtttcctggtgttgttcttcgtccattggcacagtttaagaatattaatgattat
aattatgtgactttgaaggataatgttgatatgttgaaattgattcaattgggtctcact
ttttctgatgaagatgggaatttacccacttgtgggactgataagccttgcatttggcag
tttaatttccgcgagtttaacgttaatgaagatatctttgctaatgattcgatcgagatg
ttaaggcagtgtgggattgatttcaagaagaatagtgagatgggtattgatgcgaatcgg
tttggggagcttttgatgtcttctggtgttgtgttgaatgataatatttgttgggttact
tttcatagcgggtatgatttcgggtacttgcttaagttgttgacccgtaaagagttaccc
aagtctcaagccgggttctttgagttgatcaagatttactttccgattatttatgatatt
aaacatctgatgaggttctgtaaccatcttcatggtggattgaacaagcttgcggaaatc
ttggatgttgaacggattggcgtgtgtcatcaagcagggtcggatagtttgcttacgtct
cacgcgttcaagaagttgaaagaagggtactttaatggaaacacagagaagtatgctggt
gttttgtatggtttaggggttgaagatggggataaataa
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