Helianthus annuus (common sunflower): 110898402
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Entry
110898402 CDS
T05101
Name
(RefSeq) probable pectate lyase 12
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
han
Helianthus annuus (common sunflower)
Pathway
han00040
Pentose and glucuronate interconversions
han01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
han00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
110898402
Enzymes [BR:
han01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
110898402
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Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
NosD
Motif
Other DBs
NCBI-GeneID:
110898402
NCBI-ProteinID:
XP_022000874
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Position
13:83581809..83588679
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AA seq
484 aa
AA seq
DB search
MAHRRTCIVMLYTLLAVNIAQEAGATMVFQNVTLPGQHPSPEIVVQDLQRRVNTSISRRQ
MLSYATDDSSSSCLSGNPIDDCWRCDPNWHLNRQRLADCGIGFGQYALGGKGGRYYVVTD
SSDHDAVNPRPGTLRYAVIQTEPLWIVFPTNMHIQLSQELIFNSFKTLDGRGANVHITGG
GCITLQFITNIIIHNIHIHHCYPSGNTNIRSSPTHYGYRTKSDGDGISVFGSRDIWIDHC
SLSHCKDGLVDVIMGSTGITISNNLFSHHDEVMLLGHSDDYLPDSGMQVTIAFNHFGEKL
VQRMPRCRRGYIHVVNNVYSRWEMYAIGGSGNPTINSQGNRYTAPANPNAKEVTKRVDTP
DQHWKGWNWRSEGDILMNGAFFVPSGEGLELKYEKAYSVEPKSAALIDQLTMNAGVLGSR
SNKLGKWTGGDGNGDGGVDDSENDYGEDSDGASKLNSMSFISSLLVVLLSFMFLCSSSDQ
IVLL
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atggctcacagaagaacttgcattgttatgttgtacaccttgttagcagtgaacatagct
caagaagctggagcaacaatggtgttccaaaatgtaacactacctggccaacacccttca
ccagagattgttgttcaagatcttcaaaggagggtaaatacgtccatttcacgaagacaa
atgctatcatacgccaccgatgactcatcatcctcatgtttatcgggtaacccaatcgac
gactgctggcggtgcgaccccaactggcacctaaaccgccaacgcttagccgattgcggc
attggcttcggccaatacgcactcggcggcaaaggcggccgttactacgttgtaaccgac
tcctccgaccacgacgcggtcaacccccgccccggaaccctccggtacgccgtcatccaa
accgaaccgctatggatcgtcttcccaaccaacatgcacatccaactatcacaagaactc
atcttcaacagcttcaaaaccctcgacggccgcggcgccaacgtccacataaccggcgga
ggctgcattaccctccagttcatcaccaacatcattatccacaacattcatatccaccat
tgttacccatccggtaacacgaacatccggtccagcccgacccattacgggtaccgaaca
aagtcggatggtgacgggatatccgttttcgggtcacgtgacatttggatcgatcattgc
tcgttgtcacattgcaaagatggtcttgttgatgttattatggggtctactggaataact
atatcgaataacttgttttcgcatcatgatgaggtgatgttgctcggacatagtgatgat
tatttgccggattccgggatgcaagtgaccattgcgtttaaccattttggagagaagttg
gtgcagcgaatgccccggtgccgaagagggtatatacatgttgttaataatgtgtatagc
cggtgggagatgtacgcgatcggagggagtgggaatccgacgattaatagtcagggtaac
cggtatactgctccggctaatcccaatgcaaaagaggtgacaaagagggtagatacacca
gaccagcactggaaggggtggaactggaggagtgaaggggatattctaatgaacggagct
ttctttgtgccgtcaggcgaagggttagagcttaagtatgagaaagcctacagtgtcgaa
cctaaatcggcggccttgatcgaccaactcaccatgaatgcaggtgtactcggtagcagg
agtaataagcttggaaagtggaccggtggtgatggtaacggtgatggaggtgtagatgat
agtgaaaatgattatggtgaagatagtgatggggcttctaagctaaattctatgagtttt
atttcgtctttgttagttgtgttgttatcattcatgtttttgtgttcttcgtccgatcaa
attgtgttactgtga
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