Helianthus annuus (common sunflower): 110898474
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Entry
110898474 CDS
T05101
Name
(RefSeq) DDB1- and CUL4-associated factor 8 isoform X1
KO
K11804
DDB1- and CUL4-associated factor 8
Organism
han
Helianthus annuus (common sunflower)
Brite
KEGG Orthology (KO) [BR:
han00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
han04121
]
110898474
Ubiquitin system [BR:
han04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
110898474
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Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_TEP1_2nd
EIF3I
WDR55
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
Beta-prop_EML
Beta-prop_SPT8
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT122_1st
Beta-prop_IFT140_1st
Beta-prop_WDR35_TULP_N
Motif
Other DBs
NCBI-GeneID:
110898474
NCBI-ProteinID:
XP_022000949
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All DBs
Position
13:85990190..85992818
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AA seq
462 aa
AA seq
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MKTSTLHNNNKSCSQHQILEVFSRELGLNTPRIFHHRFSASEGVVSRIGLAGKLIGHQGC
VNTVEFNRSGDRLVSGSDDRRVVLWNVASRCLVLSYDSGHADNVLQARIIPFSDERSIVT
SAADGQVRLGQVVDNGKVQTKRLGKHNGRVHKLAVEPGSPYIFYSCGEDGLVQQFDLRSD
SSTKLFCCSTFTGNIHRHSSPNRLNSITIDPRDPNYFSLGGSDEYARVYDIRKLHLGAPV
ETFCPKHLIKTRDIHITGISYSNTSELLVSYTNEHIYLFQKNMGLGPYPVAASLEHVDSL
DEPQMYSGRSNSLTVKGVSFFGPGCEYVMSGSDCGRIFIWKKKDGRVIRVMEGDKRIVNQ
VEPHPNIPVLASTGLEKNIKLWAPLSDNIHPLPRDLHKIMESNRRAGENHSGVAHTRDGV
THVLRLQRRQGRAYVERSHDRDDAARDEEDESDGNPSECNIV
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgaagacctcaactctacataacaataacaaaagttgttcacaacatcagattctggag
gtttttagcagagaattaggtctcaatacccccagaatattccatcaccggttctctgct
tccgagggtgttgtgagtagaattggtcttgctggtaagctgattgggcatcaagggtgt
gtgaacacggttgagtttaaccgtagtggtgatcggctggtgtcgggttctgatgaccgt
cgagttgtgttgtggaatgtcgcaagtagatgtttggtcctttcgtatgattcgggtcat
gctgataatgtattgcaggctcggattatcccgtttagtgatgagaggagtatagtgact
tctgctgctgatggtcaggtaagacttggtcaggtagtagacaacggaaaggtacaaaca
aaacggttagggaaacacaacgggcgcgttcacaagcttgctgttgagcctggaagtccc
tacatattctacagctgcggcgaggatggactcgttcaacaattcgatttgcgaagtgat
tcttccacaaagcttttctgttgctccacattcaccggaaacatccaccgtcattcttct
ccaaacagactgaactccattacaatcgacccacgagaccctaactatttttcactagga
ggttctgatgaatacgcacgcgtatatgatattagaaaactccatctgggtgcacccgtc
gagacattctgcccgaaacacctcatcaaaactcgcgatatccacattaccggaatctca
tactccaacacaagcgagcttcttgtttcgtataccaatgaacacatttatttatttcag
aagaatatgggcttaggcccgtaccccgttgcagcgtcgctagaacatgtggatagtttg
gatgaaccgcagatgtattctgggcgtagtaattcgttaacagttaaaggggttagtttt
ttcgggcctggttgtgagtatgttatgagcggatcagattgtgggcgtattttcatatgg
aagaaaaaagacggtagagttattcgcgttatggaaggcgataagcgtatagtgaatcaa
gtcgaaccacatccgaatattcctgttcttgcttctactggattagagaaaaatataaaa
ctttgggctcctttatcagataacattcatcccctgccgcgtgatttacataagattatg
gagtcaaacaggcgagccggagagaatcattcaggggttgcacacacacgcgatggtgta
acgcatgttttgaggcttcaacgaaggcaaggaagggcttatgttgaaaggagtcatgat
agagatgatgctgcaagggatgaagaagatgaaagtgatggaaatccgagtgagtgtaat
atcgtttag
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