Helianthus annuus (common sunflower): 110898477
Help
Entry
110898477 CDS
T05101
Name
(RefSeq) nuclear pore complex protein NUP85 isoform X1
KO
K14304
nuclear pore complex protein Nup85
Organism
han
Helianthus annuus (common sunflower)
Pathway
han03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
han00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
110898477
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
han03019
]
110898477
03036 Chromosome and associated proteins [BR:
han03036
]
110898477
Messenger RNA biogenesis [BR:
han03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
110898477
Chromosome and associated proteins [BR:
han03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
110898477
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleopor_Nup85
Motif
Other DBs
NCBI-GeneID:
110898477
NCBI-ProteinID:
XP_022000953
LinkDB
All DBs
Position
13:complement(87099975..87105831)
Genome browser
AA seq
720 aa
AA seq
DB search
MPGLLTNSGDSSSIVPYSPTTTTPTVYTLHHGLTSPITPRLSISWSRGNSLRVTVFRSPE
PASNSGDDEAGGKVVDLKLSGEDIDSEISDAARWRRIAYGSVAPFAHLQNKKNAMAALAE
LRHSVSYDGEWSKYVLEYSKQINSLLGSKKSSPPSLIEDPKTVLKKVEEPNSLKAAWELL
EIFYADKQSHPWIPEQLVDWLSDYDALFSGQVPSVHLRLVEFQAELINMQAVENEPAYWQ
AISSALAVGWLDIVVKLLRLHGSYQLHQLGARETENGLVEAVAVLVSKMPRMRVDLPSGK
LGECYNNKSDFMRAWEKWRAQITKLDCSAFWLQCSHNQTKENLKNLLQILLGNTSTLSSA
TCHWVELYIAHFLYIRPFTSGLESMYVLAQKCIQLKPVSTHHKLMRLILGILEENTEVVL
AECSRSFGPWMIAHATELLTAGSVEAEILLKEERDNLGGISIEESHRLVYAQVLSSHALT
WQIAPIYLISCVKHGVGLLEILLYKQPAYHSQVLLKNIEICRMYDLDSVSSNAMKIAGVH
HWKHGRKGAGVFWLQQAGDETRLNRIAQKLFDFVGKSISDESFEQWEGLIELLGSESRTA
GGLEFLHKYRDFKKSLQQVQDGVSIDAARKAVEALISLMKNPSTPQRFWLPLMYDSLKLL
NWQERPLLNVSQTNLLLNKLQELLVARLRPDFVEVALPPEASSSVRVALATNLGRAILEE
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atgcccggccttctaacaaactccggcgactcatcctccattgtcccctactctccaaca
accaccacacctaccgtctacactctccaccacggtctcacctccccaatcacacctcgt
ctctccatctcatggtcccgcggcaactccttacgcgtcacggttttccgatcaccggag
cctgcttccaactctggcgacgatgaagccggcggtaaagtagtagatttgaagctcagc
ggtgaagatattgatagtgagatcagtgatgctgctcggtggcgtaggatagcgtacggt
tcggtggctccgtttgcgcatctgcagaataagaagaatgctatggcggcgttggcggag
ctgcggcattcggtttcgtacgacggcgagtggtcaaaatatgttctcgagtatagcaag
caaattaattctcttctaggaagcaagaaatctagtcctccctcgttaatcgaagatcca
aagacagtattgaagaaggttgaggagccaaactctttgaaagctgcatgggagctgctg
gaaatattttatgcagacaaacagtctcacccttggatccctgaacaacttgttgattgg
ttatctgattatgatgctctgttctctggacaagtgccaagtgttcatttaaggctggtt
gagtttcaagcagaacttattaatatgcaggcagttgaaaatgagcctgcatattggcaa
gcaatttcttcagcacttgcagttggctggctagacattgtggtgaaattgttgcgttta
catggatcttatcagcttcatcagctaggagctcgtgagacagagaatggacttgtagaa
gcagttgcggttctcgtatcaaaaatgccacgcatgcgtgtggatttaccatctggaaag
ttaggtgaatgttataataacaagtctgattttatgagggcatgggagaaatggcgagcg
caaataaccaaattggattgtagtgcgttctggcttcagtgcagtcataatcaaaccaaa
gaaaacctgaaaaatttgcttcaaattttgttgggaaacactagtactctgtctagtgcc
acctgtcattgggttgagctgtatattgctcactttctatatatcaggccctttacttcg
ggtttagaaagtatgtacgttctagctcaaaaatgcatccagttgaaaccagtttctact
caccataaactcatgcgacttatacttgggattcttgaagaaaatacagaggttgtattg
gctgagtgctcaagatcatttggtccatggatgattgcccatgctacagagttgctgaca
gctggcagtgttgaggcagaaattctgttaaaagaagaacgcgataatttaggggggatt
agcatagaggaatctcatagactcgtttatgctcaagtgttatcttctcatgccttaact
tggcaaattgctccgatatatttgatatcttgtgtgaaacatggagttgggttgttggaa
atcttgttgtacaagcaacctgcatatcatagtcaagttctcctcaagaacatcgagata
tgtcgtatgtatgatcttgatagcgtgagctcaaacgccatgaagattgctggagtgcat
cactggaagcatggtaggaaaggtgcaggcgtcttttggctacaacaagccggcgatgaa
actcgccttaatcgaatcgctcaaaagttgtttgactttgtcggaaagtcaatctccgac
gagagtttcgagcaatgggaaggattaattgaattattgggctcggaatctagaactgca
gggggtcttgagtttcttcataaataccgggattttaagaaatctctgcagcaggtccaa
gatggcgtttctatcgatgccgctcgaaaagctgttgaagctttaatatcgcttatgaaa
aatccttctacgcctcaacggttttggctgcctcttatgtatgattcgttgaagttgctc
aactggcaagagcggcctctgttgaatgtatctcagactaatctgctactgaataagttg
caagaattattggtggcaagactgcgccctgattttgttgaggtggcgctgccgccagaa
gcctcgagctctgttagggtggctcttgccactaatttagggcgcgctatcctcgaggaa
tga
DBGET
integrated database retrieval system
