Helianthus annuus (common sunflower): 110898498
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Entry
110898498 CDS
T05101
Name
(RefSeq) pre-mRNA-processing protein 40A
KO
K12821
pre-mRNA-processing factor 40
Organism
han
Helianthus annuus (common sunflower)
Pathway
han03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
han00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110898498
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
han03041
]
110898498
Spliceosome [BR:
han03041
]
Complex A
U1 snRNP components
U1 related factors
110898498
Complex B
110898498
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Gene cluster
GFIT
Motif
Pfam:
FF
WW
FF_RHG35_4th
WW_TCERG1
Motif
Other DBs
NCBI-GeneID:
110898498
NCBI-ProteinID:
XP_022000980
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Position
5:137904700..137914614
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AA seq
919 aa
AA seq
DB search
MANNSQYPGIQPPRPPVAAMGPPPNTYPPVAMQFRPAGPPRPPPPYMPIVSQQFLAVRPN
MVSQPMQHLPPRPGPPAPPLAHSIAPPPPPPPAAQVFPVPDVQPIRPVMSVSPQAQQAVP
APNNYGPGQSGPRAAISLSYNLPTPAPAQAHVNAEVTSQYQPISSTNMHGFPLGGPAVTP
MLQPAEVASSVQVTTDLPKAASDWIEHTSHKGKRYYYNKKTKISSWEKPLELMSPTERAD
ASTNWKEYPAPDGRKYYYNKVTKQSKWKIPDELKLAREQVITKSNTNEQQSTKDPDNETL
VPSLTPGSDSPSSQAHEPGPSPVPVPDLIPPVQSGSVLTSEPTASIESSKGTTNAAEETP
MTETLPLSTVEIVSANNAVIAENGTIEEFNKGSVTNDSANGAALEEKAFDQETQVYEDKQ
EAKNAFKALLENANVASDWTWDQTMRVIINDRRYGALRSLSERKQAFTEFIVQKKKQEAE
QRRAKHKKAREEFKKMLEESKEITVSTKWSKVAAIFEDDDRFKAIERLKDREDLYDDYIT
EREKKERSKALEEHKKNRKEYIEFLKSCDFLTASSQWRKVQGRLEADESCLRLEKVDRLE
IFQEYIRDLEKDEEEQRKLRAEELRKTERKNRDEFRKLMDEHIASGMLTSKSHWRDYCVK
VKESPAYLAVSSNSSGATPKDLFEDVLEELEKQYTEDRDRIKEIVKMRKVSILSTWTIED
FKNAIAEDISSQPVSDVNLKLVFDELLERAQEKEEKEVKRRKRVVDDFYASLTTYKEITS
SSRWEDVKPLFEDRLESCVEESVFREMFDKYITELKKARDERKHREDKGKDRDRRTEKSR
RDKNNKGKSDKRRRDHSRDSHRHSAERKKTKQLEQQSSASAEYESRHKRHKRDYRRDDQR
VSEDHRHDDQRVAEDGELW
NT seq
2760 nt
NT seq
+upstream
nt +downstream
nt
atggccaacaattctcagtatcctggcatacagccgcctcgacctcctgttgccgccatg
ggaccacctccaaacacttatccaccggtcgcaatgcaattccgcccagcaggtccgcca
cggccgccaccgccatatatgcctattgtatctcaacagtttcttgctgtgaggccaaat
atggtgtctcagccgatgcaacatttacctcctagacctggaccaccagcgccaccgctg
gcacatagcatagcgccacctcctccaccgccgcctgccgctcaagtttttccagtgcct
gatgttcaaccgatccgacctgtaatgtctgtatcaccacaggcccaacaggctgttcca
gcacctaataactatgggcccggtcagagcggtccacgggctgccatatctttatcatac
aacttaccgacaccagcacccgctcaagcacacgtaaacgcagaagtaacaagccaatac
cagccgatatcctcaacaaatatgcatggttttcctctaggtggaccggctgtaacacct
atgttgcagcctgctgaagttgcatcttctgttcaagtaacaactgatctacccaaagct
gcatcagattggattgaacatacttctcacaaaggaaaaagatactattacaacaaaaag
acaaaaatatccagctgggagaagcctctcgagttgatgagcccaactgagagggccgat
gcatctacaaattggaaggaatatcctgctcccgatggaagaaagtactactataacaag
gttaccaagcaatcaaagtggaaaatacccgatgaactcaagttggctcgtgagcaagtg
ataaccaaatctaataccaacgaacagcagtcaacaaaggatcccgataacgaaaccctg
gttccatcactgactcctggctcagatagcccatcgtctcaggctcacgaaccgggaccg
agccctgttccagtgcctgatcttattccacctgtgcaatcaggatctgttttgacctct
gagccaacagcatcgatcgagtcttctaaagggacaacaaatgccgctgaagaaacacca
atgaccgaaacgttaccattgagtactgtggagattgtttcggcaaacaatgcggtaatt
gcagaaaatggtaccatcgaggaattcaataaaggcagtgtaactaacgatagcgctaat
ggtgctgctttagaagaaaaggcatttgatcaggaaacccaagtttacgaggataagcag
gaggctaaaaatgcatttaaggctcttctagaaaatgcaaacgttgcttctgattggact
tgggatcagacaatgagggtaattattaatgacagaagatacggtgctctcagatcactt
tcagagcggaagcaagctttcactgagtttatagtacaaaagaaaaaacaggaagcagaa
cagaggcgggctaaacacaagaaagcacgcgaggagtttaagaaaatgctagaagagtca
aaggagatcacagtgtccactaaatggagcaaagtggctgctatctttgaggatgatgat
cgcttcaaagcaattgagcgattgaaagaccgcgaggacctctatgacgattatataacg
gaacgtgaaaaaaaggagcggtcaaaggctttagaggagcacaagaaaaacaggaaggag
tacattgagtttttaaaatcttgcgatttcctcacggcaagcagtcagtggcggaaagtg
caaggtcgcttagaagctgatgaaagttgcttgcgccttgaaaaagttgatcgtttagaa
atattccaagaatatatacgtgatttagaaaaggatgaggaagagcagaggaaattacga
gcggaagaattaagaaaaacagagcgtaaaaatcgggatgaatttcgcaaattaatggat
gaacatattgcttctgggatgctgacttcaaaaagtcactggcgtgactattgcgtaaaa
gtgaaagaatcacctgcttatttagcagtgtcatcaaacagttccggtgccaccccgaaa
gatttgtttgaagatgtattagaggagcttgagaagcagtatacggaggacagggaccga
ataaaagaaatagtgaagatgagaaaggtttccattttatctacgtggactattgaagac
ttcaagaatgcaattgctgaagatattagctcacaaccggtttcagatgttaatttaaag
cttgtatttgatgagttactagagagagctcaagagaaggaggagaaagaagtcaaaagg
cgtaaacgtgttgtagatgacttttacgcatctttgacaacttataaggaaataacttca
tcttcccgatgggaagacgttaagcccctttttgaagataggctagaaagctgtgtggag
gaaagcgtctttagggagatgtttgacaaatacataacagaactaaagaaagcaagagat
gagcggaagcacagggaggataagggtaaagatagagataggaggacagaaaaatcaaga
agggacaagaataataaaggtaaaagcgataaacgccgaagggatcattctagggattct
cacagacatagtgctgaacgtaaaaagacaaaacagttggagcaacagtcatctgcgtcg
gcagaatatgagagcagacataagagacacaagagagattatagacgtgatgatcaaaga
gtatccgaggatcataggcatgatgatcagagagtagctgaagatggtgaactttggtag
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