Helianthus annuus (common sunflower): 110898591
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Entry
110898591 CDS
T05101
Name
(RefSeq) vacuolar protein sorting-associated protein 41 homolog
KO
K20184
vacuolar protein sorting-associated protein 41
Organism
han
Helianthus annuus (common sunflower)
Pathway
han04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
han00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
110898591
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
han04131
]
110898591
Membrane trafficking [BR:
han04131
]
Endosome - Lysosome transport
Tethering complex
Hops complex
110898591
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_Vps41
Beta-prop_Vps41
zf-RING_Vps41
Clathrin
WD40
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_HPS5
WDR55
Beta-prop_EML_2
zf_RING_Vps8
ANAPC4_WD40
WD40_Prp19
zf-RING_2
EIF3I
Beta-prop_WDR90_POC16_2nd
WDR90_beta-prop_4th
zf_RING_Vps8_fungal
PEP5_VPS11_N
Beta-prop_WDR11_2nd
Motif
Other DBs
NCBI-GeneID:
110898591
NCBI-ProteinID:
XP_022001085
LinkDB
All DBs
Position
13:91213379..91226002
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AA seq
956 aa
AA seq
DB search
MSPRPSENGTEGDDEREEGEEEDTEDETNNNEEEDEEEDEPRLKYQRMGGTVPTLLSSDA
ASCVAVAERMIALGTHAGSVHILDFLGNQIKEFRAHTAAVNDLCFDLDGEFIGSCSDDGS
VVIISLFTDEKLKFEYHRPMKAIALDPDYSRKASRRFVAGGLAGNLYFNVKKWLGYRDQV
LHSGEGPIHAVKWRTSLIAWANDAGVKVYDAANDQRVTFIERPRGSPRPELLLPHLVWQD
DALLVIGWGTAIKIASIKTNQARGVNGSYRQITTSNMNQVDIVASFQTSYFISGVAPFGD
SLVVLAYIPGEEDGEKEFSSSVPSRQGNAQRPEVHVVTWNNDELATDALPVLGFEHYKAK
DYSLAHVPFTGSSYAGGQWAAGDEPLYYVVSPKDVVIAKPRDAEDHINWLLQHGWHEKAL
AAVEAGQGRSELLDEVGSRYLDHLIVERKYAEAASLCPKVLRGSAAAWERWVFHFAHLRQ
LPVLVPYIPTENPVLRDTAYEVALVALATIPSSHKDLLTAVKSWPPAIYSALPVIAAIEP
QLNTSSMSDELKEALAVLYEIDGQYDKAFALYADLMKPDIFEFIEKNNLHDAVREKVVQL
MQIDHKRAVSLLIQYRDVITPAEVVSQLLASKKQCDSRYFLYEYLHSLFEVNPHAGRDFH
DMQVELYAEYDKKMLLPFLRSSQHYMLEKAYEVCVNKNLLSEQVFILGRMGNTKQALAVI
IDKQGDIKEAVEFVSMQHDDDLWEELIRQCINKPEMVGVLLEHTVGNLDPLYIVNIVPNG
LEIPRLRDRLVKIITDYRTETSLRHGCNDILKADIVNLLVKYYKEARRAIYLSNEEQESR
SNMNNEGSNPMERAPVLKSMDAKSKTRAGGRCCICFDSLSIQGASMIVFFCCHAYHLHCL
TDSTNNITTQKGTGVTSSNSYANGDYIEDEDDENDQDTPSGGSRMRCVLCTTAAGG
NT seq
2871 nt
NT seq
+upstream
nt +downstream
nt
atgtctcctcggccatcagagaacggaaccgaaggcgacgacgagcgagaagaaggcgaa
gaagaagacaccgaagacgaaaccaacaacaacgaagaagaagatgaagaggaagatgaa
ccgaggcttaagtaccagcgaatgggaggcaccgtgcctacgctgttatccagtgacgct
gcttcctgtgttgccgttgctgaacgcatgatcgctctcggtactcatgccggttccgtt
catattctcgattttttaggcaatcagattaaggaattcagggctcatactgctgcagtc
aatgatctttgctttgacttggatggtgaattcattggaagctgttcagacgacgggtct
gtagttattatcagtcttttcacagatgagaaacttaaatttgagtatcatcgccctatg
aaggctattgcactagatccagattattcaaggaaagcatctagaagatttgttgctggt
ggtctggctggaaatttatattttaatgttaaaaaatggttaggctaccgtgatcaggtt
ttgcattccggagaaggtccaatacatgcagtgaaatggagaacaagtctaatcgcatgg
gctaacgatgctggagtgaaagtttacgatgccgctaacgatcaacgtgttacatttatc
gaaaggcctaggggaagcccgcggcccgagcttcttcttccccacttagtttggcaagat
gatgcccttcttgttattggttggggaacagctataaaaattgcgtcgataaaaactaat
caagcgaggggggtaaacgggtcatatcggcaaattacaacctccaatatgaaccaagtt
gatattgtggcgtcttttcaaaccagttatttcatatcgggagttgctccctttggtgac
tcgttagttgttttagcttatatacctggtgaagaagatggagagaaggaatttagtagc
agtgttccatcacggcagggaaatgcacaaagaccagaagtgcatgtagtgacatggaac
aatgacgagttggcgacagatgcattacctgtgcttggatttgagcattacaaggcgaaa
gattactctcttgctcatgtaccttttacaggtagcagctatgcagggggtcaatgggca
gctggtgacgaaccgttatactacgttgtgtccccaaaagatgtggttattgcaaaacct
agggatgcagaagatcatattaattggcttcttcaacacggatggcacgagaaagcttta
gcagccgttgaagctggacaaggccgtagtgagctccttgatgaggtggggtcaagatat
ctggatcatttgattgtagaaaggaagtatgctgaagcagcttctttatgtcccaaagtt
ctgcgaggttctgcagcagcatgggagagatgggttttccactttgctcatctccgtcag
cttcctgtgctggttccgtacatcccaactgaaaacccagtactacgtgataccgcttat
gaggttgctcttgtggctctggcgacaattccgtcttcccacaaggatcttttaactgcc
gttaaatcttggccacctgcaatatactctgcgttacccgtcattgcagccatagagccc
cagcttaacacgtcatccatgagtgatgaactcaaagaggcactggcagtgttatatgaa
attgatgggcaatatgataaagcttttgcactttatgctgatcttatgaaaccagatatc
tttgagtttattgagaagaataacttgcatgatgccgttcgtgaaaaggttgtccagcta
atgcagatcgatcataagcgtgcagtttcactgttaatccagtaccgggacgtaattacc
cctgctgaagttgtttctcaacttctggcttcaaaaaagcaatgcgattcccgatatttt
ctctacgagtatttgcattcactgtttgaagtaaatccgcatgctggcagagattttcat
gacatgcaggtcgagctttacgcagaatacgataaaaaaatgctacttccgtttctgcgt
agcagtcaacattatatgcttgaaaaggcctatgaagtttgcgttaataaaaatttacta
agtgagcaagttttcattcttggaagaatgggaaacacaaagcaagcccttgctgttatt
atcgacaaacaaggggatatcaaagaggctgtagagtttgttagcatgcagcatgatgac
gacctgtgggaagaacttattagacaatgtattaataaacctgaaatggttggtgttttg
ttagagcatactgttggcaatcttgaccccctttatatcgtcaacattgtaccaaatggt
ttggaaatccctcggctgagggaccgtttagttaagattatcacagattacagaacggaa
acttctctgagacacggttgtaatgatatacttaaggcggatatcgtcaaccttttagta
aaatattacaaagaagcaagacgagcaatatacctcagcaatgaagaacaagaatcacgt
tccaacatgaacaacgaagggagtaatccaatggagcgagccccggtcctaaaatccatg
gacgccaaatcgaaaacccgagcaggtggaagatgttgcatctgtttcgactccttatcc
atacagggtgcatcgatgatcgtcttcttttgttgtcatgcgtatcacttgcattgttta
acggattccacgaataatattactacccaaaaagggacaggagtcacgtctagtaactct
tacgctaatggtgattatatagaggatgaagacgatgaaaatgaccaagataccccttcg
ggtggctctcggatgcgatgtgtcctgtgcaccactgctgctggtggttga
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integrated database retrieval system
