Helianthus annuus (common sunflower): 110898764
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Entry
110898764 CDS
T05101
Name
(RefSeq) serine/arginine-rich splicing factor RS40 isoform X1
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
han
Helianthus annuus (common sunflower)
Pathway
han03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
han00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110898764
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
han03041
]
110898764
Spliceosome [BR:
han03041
]
Common components
Common spliceosomal components
SR proteins
110898764
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Nup35_RRM_2
RNA_bind
RRM_occluded
RRM_Nup35
DUF2129
Motif
Other DBs
NCBI-GeneID:
110898764
NCBI-ProteinID:
XP_022001291
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All DBs
Position
13:complement(96389235..96393762)
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AA seq
349 aa
AA seq
DB search
MRPIFCGNIEFDARQGDLERLFRKYGKVDRVDLKSGFAFIYMEDERDAGDAIRALDRYEF
GRKGRRLRVEWTKQERNVREPVSSKRSSSNSRPSKTLFVINFDPYNTRTRDLERHFDPYG
KILNIRIRRNFAFIQYELQEDATKALESTNMSKLMDRVISVEYAIKDDDDRKNGSSPGGH
DRSPRRRSDDRGRSQSPYRRERGSPDYGRGRDRGSPDYGRGRGRSPSPHRRDRGSPVYDR
GSSLGANGKGRARNADYRRDASPSPRRERERTRSPRGSNPKERTSPEYEHGAIVSPQSEG
RVSPNDYPREPSPDPKPDTHDSPGYNSGAESPPERYRSRSPEARERSRS
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atgaggcctattttctgtggaaacattgagttcgatgcacgacagggtgatttggagaga
ctctttaggaaatatggaaaagttgatagagtggatctgaagtctgggtttgctttcatc
tatatggaagatgaaagagacgctggagacgcaattcgtgcacttgaccgttatgaattt
ggcaggaagggacgccgacttcgtgttgagtggactaagcaagaacgcaatgtcagagaa
cctgtaagctctaaaaggtcttcatctaattcgaggccctcaaaaacgttgtttgttatc
aatttcgatccgtataacactagaacaagggatttggagcgacactttgacccttatggt
aagattttgaacataaggatcaggaggaattttgcttttattcagtatgagctacaagag
gatgccaccaaagctcttgaatctactaatatgagcaagctgatggatcgggttatatcg
gttgaatacgcaatcaaagatgacgatgacagaaagaacgggagtagccctggaggtcat
gacaggtctccccgtaggagaagcgatgacaggggaaggtcgcaaagtccatataggaga
gagagaggaagtcctgattacgggcgtggacgtgaccggggcagcccagattatgggcgt
ggacgagggcgtagcccgagcccacaccgcagggaccgtggcagccctgtttatgaccgt
ggttctagccttggtgctaatggaaagggtagggcccgcaacgctgattatcgacgtgat
gccagcccgagtcctcgtagggagagggaaagaaccagaagtcctcgtgggtccaaccca
aaggaaaggactagcccggaatatgaacatggtgcaattgtgagccctcaaagtgaaggt
cgggttagccctaatgactatcctcgtgaaccgagccctgatcctaaaccagatactcat
gacagtccgggttataatagtggagctgaaagcccacccgagcgttaccgcagtaggtcg
ccagaagcaagggagagatcgcgatcgtga
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