Helianthus annuus (common sunflower): 110898821
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Entry
110898821 CDS
T05101
Name
(RefSeq) E3 ubiquitin-protein ligase HAKAI homolog
KO
K15685
E3 ubiquitin-protein ligase Hakai [EC:
2.3.2.27
]
Organism
han
Helianthus annuus (common sunflower)
Brite
KEGG Orthology (KO) [BR:
han00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
han03019
]
110898821
04131 Membrane trafficking [BR:
han04131
]
110898821
04121 Ubiquitin system [BR:
han04121
]
110898821
Enzymes [BR:
han01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
110898821
Messenger RNA biogenesis [BR:
han03019
]
Eukaryotic type
mRNA processing factors
3' end processing
N6-methyltransferase complex
110898821
Membrane trafficking [BR:
han04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
110898821
Ubiquitin system [BR:
han04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
110898821
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_3
zf-C3HC4
Motif
Other DBs
NCBI-GeneID:
110898821
NCBI-ProteinID:
XP_022001354
LinkDB
All DBs
Position
13:100653956..100659682
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AA seq
367 aa
AA seq
DB search
MLQIRLSNKAAASESGGGAKLPSGETVTVACPDHLVLAELPVAKSLGAANGVTLVKTVGR
RSRRPLGERVHFCVQCDFPIAVYGRLIPCEHAFCLDCARSDSICYLCDERIQKIQTIKMM
EGIFVCAAPHCLKSFLKKTDFEAHVHTVHADLVNSNPQKDGNESEAASAKKPTTSDSTVQ
APTPKPAQDGERSQPQPVIRPPIQPHVNPPHGFDGATPMHVQQPNFDYPVTALQPPGFVV
PVNPNVMGPGSFGQPLYMGQQVPEAGVEQGSLLGYPQTWNVGPNGQPFDPSMMMNQGGFF
QGGMPSQGVSGNDGRSGGVMAANPSLPPPLPAQPMPFGNFHGGDSSHGAMGYGWQQDKRD
GFGNGQE
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
atgcttcaaattcggcttagcaacaaggccgcagcttcagaaagcggaggtggagcaaag
ctcccatcaggggagacagtgacggttgcatgcccggaccaccttgttctggcagagctt
ccagtggctaaaagccttggtgccgctaacggtgttactctggtcaagaccgttgggcgt
aggtcccgccgaccgcttggtgaacgggtccatttctgtgttcagtgtgattttcccata
gcggtttatggacgcttgattccttgtgagcatgctttttgccttgattgcgctaggagt
gactctatatgctatttgtgtgatgaacgtattcagaagatccaaacaatcaaaatgatg
gaaggcatctttgtatgtgcggccccacattgtctaaaatccttcttgaaaaaaacggac
ttcgaggcacacgtacacaccgttcacgctgatcttgttaattcaaatcctcaaaaagac
ggaaacgagtctgaagctgcaagcgccaagaaaccgacaacttctgactcaacggttcaa
gccccaactccaaaaccagcccaagacggtgaacggtcccagccccaacccgtcattaga
ccacccatacagccgcacgttaacccgcctcatggttttgacggggcaacaccgatgcac
gttcagcaaccgaattttgactaccctgtgaccgcccttcagccaccagggtttgtagta
ccggtgaacccgaatgtgatgggtcctggttcattcggtcaaccgctctacatgggtcaa
caggttccggaagcgggtgtggaacaagggtcgttattgggttatcctcaaacttggaat
gttggaccgaatggtcaaccgtttgacccttctatgatgatgaatcaaggtggtttcttt
caaggaggtatgccatcacaaggggtgagtggtaatgatggaaggagcggtggtgtcatg
gcggcaaacccgtcactcccgccaccacttccggctcaacctatgccattcggcaatttt
catggtggtgattcgagtcatggtgcaatggggtatgggtggcaacaagacaagcgtgac
ggttttgggaatggtcaagagtaa
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