Helianthus annuus (common sunflower): 110899322
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Entry
110899322 CDS
T05101
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 28 isoform X1
KO
K13181
ATP-dependent RNA helicase DDX27 [EC:
5.6.2.7
]
Organism
han
Helianthus annuus (common sunflower)
Brite
KEGG Orthology (KO) [BR:
han00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
han03041
]
110899322
03009 Ribosome biogenesis [BR:
han03009
]
110899322
Enzymes [BR:
han01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
110899322
Spliceosome [BR:
han03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
110899322
Ribosome biogenesis [BR:
han03009
]
Eukaryotic type
Pre-60S particles
Helicases
110899322
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
AAA_22
Motif
Other DBs
NCBI-GeneID:
110899322
NCBI-ProteinID:
XP_022001901
LinkDB
All DBs
Position
13:129504178..129521079
Genome browser
AA seq
738 aa
AA seq
DB search
MEDSEFAFEPPSDEEIDYEDVSNGGEDEEENSDVEEKGLSKTKTQSPWDFSSYTESVAEE
HARRSTTSIDDKISKLIQQRNAEIIPEKDEVDDDVSSDSEPDRQEDLKPEEEDDEVLTAV
SSGDNRSFFTKADGVSFHADSFSNLHLSRPLLRACEALGYTQPTPIQAACIPLALTGRDI
CGSAITGSGKTAAFALPTLERLLFRPKRRPAIRVLILTPTRELAVQIHSMIGKLAQFVTD
IRCCLVLGGLSVKDQEAALRSMPDIVVATPGRIIDHLSNSMSIDLDDLSVLILDEADRLL
ELGFEAEIRELVRLCPKRRQTMLFSATMTEQVDELIKLLLNKPLRLSADPTTKRPPKLTE
EVVRIRGKLEGNQEAVLLALCSKTFTSKAIIFSGTKQAAHRLKILFGLAGFKAAELHGNL
TQAQRLDALELFRRQEVDFLIATNVAARGLDIIGVQTVINYECPRDLTSYVHRVGRTARA
GREGYAVTFVTDNDRSLLKAIAKRAGSKFKRRTVADPAITKWSRVIEQMEDQVASILREE
REEMALRKAEMEADKAENMIRHRDEIFSRPKRTWFVTEKEKKLVANAGKEADKGSKKKVM
SAEEAEERRKKEKKKREHEKNLPRKKRRKLEASREMLEDEAENEGNNRSKKDKPGISLVD
LAYRRAKGAKGAKKAADAGKAVRTNKKGAKKSSSRVSNSRPEEMKELFQSDMSEKKQKRS
LGGKKASSFKSKSRYKRR
NT seq
2217 nt
NT seq
+upstream
nt +downstream
nt
atggaagattcagagtttgcctttgaacctccaagcgatgaagaaattgactatgaagac
gttagcaatggcggagaagacgaagaagaaaacagtgatgtagaagaaaaaggattaagt
aaaacgaagacacagtctccgtgggacttttcttcttacactgaatcagttgcagaagaa
cacgctcgcagaagcactacttccatagatgataaaatctcaaagctcattcaacaacgt
aatgcagaaataataccagaaaaagacgaggttgatgacgatgtttcttctgattctgag
ccagaccgccaagaagatttaaaacccgaagaagaagacgatgaggttcttaccgccgta
tctagtggagataatagatcattctttacaaaagcagatggtgtttcctttcatgcagat
tccttctctaatctccacctttctaggccattgcttcgagcttgtgaagccttgggttac
acgcaaccaacacctattcaggcagcatgtataccattggcgcttactggacgtgacata
tgtggtagtgcaattactggctctgggaagacagctgcctttgctttgccaacactagag
agattgttgtttcgtcccaaacgtagacctgcaataagggtcctcattcttacccctaca
agagagttggcagttcagatccatagcatgatcggaaaacttgcgcagtttgttacagac
atccgatgttgccttgttcttggcgggctttcagtgaaggatcaagaagcagcattgaga
tccatgccagatatagtggtggccacccctggacgtataatagatcatctaagcaattct
atgtcgatagatttggacgatctttcagttctaatccttgatgaagcagaccgtcttctt
gaacttgggtttgaagctgagattcgtgaattggttagactttgccccaaacgaagacag
acgatgctgttttcagctactatgactgagcaagttgacgaacttattaaattattactg
aacaaacccttgcgtctctctgccgacccaaccacaaagcgaccaccaaagttaacagag
gaggtcgttagaatacgagggaagcttgaaggaaaccaagaggctgttcttcttgcattg
tgttctaagacatttacatccaaagcgatcatattcagcggaacaaaacaagcagcacat
aggttgaagattttatttggtttagctggctttaaagctgccgagcttcatggaaatctc
acacaggcacaacgtttagatgcgttggaacttttcagaaggcaggaagttgattttctg
atagctactaacgttgctgctcgtgggcttgatattattggagtccaaacggttatcaac
tatgagtgcccacgtgatcttactagctatgttcatcgagtcggtcggactgctagagct
ggtagagaaggctacgctgttacgtttgtcaccgacaatgacagatctctcttaaaagct
attgcaaaaagagctggttcaaagttcaagcgtcgtactgtcgctgacccagcaataact
aaatggagccgagtaattgagcaaatggaggatcaagtagcatcaattcttagagaggag
agggaagaaatggccttaagaaaagctgaaatggaggcagacaaggcagagaatatgatt
agacacagagatgaaatattttctcgtcccaaaaggacttggtttgttacagagaaggag
aaaaaactcgttgctaatgctggaaaggaggccgataaaggttctaaaaagaaagtgatg
agtgctgaagaagctgaagagcgtaggaagaaagaaaagaaaaagagagagcatgagaaa
aatcttccaagaaagaaaagaaggaaacttgaagcatctagagagatgctggaagatgaa
gcagaaaatgagggcaacaatagaagcaagaaagacaaacctgggatttctctagttgat
ttggcatataggcgtgcgaaaggagcaaagggtgctaaaaaagcagctgatgcgggcaag
gctgtgaggaccaataagaaaggagcaaagaagtcttcttctcgtgtaagtaattcaaga
ccagaagaaatgaaggaactttttcaaagtgatatgagtgaaaagaagcaaaaaagaagc
ttgggtggcaagaaagcctcatcgtttaagagcaagtcaaggtacaagcggaggtag
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