Helianthus annuus (common sunflower): 110900921
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Entry
110900921 CDS
T05101
Name
(RefSeq) polygalacturonase
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
han
Helianthus annuus (common sunflower)
Pathway
han00040
Pentose and glucuronate interconversions
han01100
Metabolic pathways
Module
han_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
han00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
110900921
Enzymes [BR:
han01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
110900921
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Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Gp49_Pectate_lyase_like
Beta_helix_3
Motif
Other DBs
NCBI-GeneID:
110900921
NCBI-ProteinID:
XP_035841803
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Position
2:172082391..172084396
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AA seq
389 aa
AA seq
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MVIKHIMVLLFLVFRLSSATVTYNVQIFGAKPDGRSDSKNAFLKAWSLSCNSTSPASIYV
PAGRYLIASALTFSGQGCKSRAITFNIAGTLVAPSSYNAIGNALVWIKFYIVKNVTINGG
TLDAQGSSLWACKTSGKACPKGSTTLGFYHSQNIVISKLRSLNSQMFHMLLYSCKNAKIQ
GVSIVAPGLSPNTDGIHLTYSTGITILSSKISTGDDCVSIGPGNSNIWIEKVVCGPGHGI
SIGSLGWEREEPGVQNVTVKTTTFVGTTNGLRIKAWARSSNGFVNGVYFKGATMMNVKFP
IIIDGKYCPNNNNCPNEASGVKISNVMYENVHGTSATRVAVKFDCSKGNPCRGIVLKDVD
LKFGGQPANSSCSYAAGTASGLLRPTSCL
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atggtgatcaaacatatcatggtcttgctttttctagtttttcggttatcatccgcaacg
gttacatacaatgtccaaatttttggagccaagccagacggccgctcagactcaaagaac
gcgttcttgaaagcatggagtttgtcatgtaactctaccagtcccgccagcatttatgtg
ccagctggcaggtacttgattgcctcggcgcttacattctctggtcaaggatgtaagagc
cgagccatcacattcaacatagctggtaccttggtggcaccatctagttataacgctatt
ggcaacgcgctagtctggatcaagttctacatagttaagaatgttaccataaacggtggg
acccttgatgcccaaggatcttctctatgggcctgcaaaacatctggaaaagcatgtcct
aaaggatctacaacacttggcttctaccattcccaaaacatagtgatcagtaaattaagg
tcgttaaacagccaaatgtttcacatgttgctctatagttgcaagaacgcgaaaatacaa
ggagttagcatcgtagcacctggactcagcccgaacacagacggcatccatttaacatat
tccacaggaatcaccattttgagctctaaaatctcaacaggcgacgactgcgtctcgata
ggcccgggaaactctaatatctggatagaaaaggtggtttgtggacccggtcacggcata
agcattgggagtctagggtgggaacgggaagaacccggtgtccagaatgtaacagtaaaa
acgaccacattcgtaggtacaacgaacggtctgaggataaaagcatgggcgaggagtagc
aatgggttcgttaacggtgtttatttcaagggagcaacgatgatgaacgttaagttccca
atcatcatagacggaaagtactgtccgaataataacaactgtccgaatgaggcttcagga
gtaaagatcagcaacgtgatgtacgaaaacgtgcatggaacatcagcaacacgcgtggca
gtgaagtttgattgcagcaaggggaatccgtgtcgtggaattgtattaaaggatgttgac
cttaaatttggaggtcaaccagcgaattcctcttgctcgtatgctgccggcactgcttct
ggattacttcgacctacaagttgtctataa
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