Helianthus annuus (common sunflower): 110901230
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Entry
110901230 CDS
T05101
Name
(RefSeq) probable polygalacturonase At3g15720
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
han
Helianthus annuus (common sunflower)
Pathway
han00040
Pentose and glucuronate interconversions
han01100
Metabolic pathways
Module
han_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
han00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
110901230
Enzymes [BR:
han01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
110901230
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GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Motif
Other DBs
NCBI-GeneID:
110901230
NCBI-ProteinID:
XP_022003762
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Position
13:complement(88853084..88856554)
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AA seq
336 aa
AA seq
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MAFKGMGFLVVILLSFCYVLFSPENASAATLDVTSYGAKGDGTTDDSQAFLQAWADLCGD
ASGDPTLIIPSGMTFLISPLKFVGSSCKSPNINIKALHFIGCPGLRLKDTTHINSPSLHI
SIKECQDADIGNLQIIAPENSPNTDGIDISASSHVNIHDSSIQTGDDCVAINGGVVDINV
TNVFCGPGHGISIGSLGENGGHDTVEQVLVQNCNITGTKNGLRIKTVPNGTGYAKGIRFQ
DINLVNVKNPIIIDQHYCPHSENPSELEAVQVSDVTYTNIYGSSASKLGIIFNCSEIHKC
TNIVTNNIHITGGEDLAYCKNTQGEFVDTTPNISCD
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atggctttcaaaggaatgggtttcttggtggtaatcttgttgagcttttgttacgttttg
tttagcccggaaaatgcaagtgcggctactttggacgtaacatcttatggtgcaaaaggc
gatgggactacagacgactctcaagcattccttcaagcatgggctgacttatgtggtgat
gcttctggagacccaacgttaatcataccatcaggcatgacatttttaataagcccgctg
aaattcgttggttcgtcatgcaaatcccctaatataaatatcaaggctttacattttatc
gggtgcccgggtcttcgtctgaaagacacaacacatattaacagcccatctcttcatatt
agtattaaggaatgccaagatgctgatatcggaaatcttcaaatcatagcacccgaaaac
agccccaatactgatgggattgacatcagtgcttcctcacatgttaatatccatgactct
agtattcaaactggtgacgattgtgtggctatcaatggtggcgttgttgatattaatgtg
acaaatgtgttctgtggacctggtcatggcataagcatcggaagccttggggaaaatggg
ggtcatgacaccgttgaacaagtactagtacaaaactgtaacatcacaggaacgaaaaat
ggattacgaatcaagacagtaccgaatgggaccgggtatgctaaggggatccgatttcag
gacattaatcttgttaatgtcaaaaatccaatcataattgatcaacattactgcccccat
tctgaaaatccatcggaattagaagcagtacaagtgagcgacgtgacatatacgaatata
tacggatcttcagcatcaaagcttgggattattttcaattgcagtgagatacacaaatgc
actaatatcgtgacaaacaacatacatattactggaggtgaagatcttgcttactgcaaa
aacactcaaggagaatttgttgataccactccaaatatcagctgtgattag
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