Helianthus annuus (common sunflower): 110901259
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Entry
110901259 CDS
T05101
Name
(RefSeq) probable polygalacturonase At3g15720
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
han
Helianthus annuus (common sunflower)
Pathway
han00040
Pentose and glucuronate interconversions
han01100
Metabolic pathways
Module
han_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
han00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
110901259
Enzymes [BR:
han01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
110901259
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_28
Motif
Other DBs
NCBI-GeneID:
110901259
NCBI-ProteinID:
XP_035838158
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All DBs
Position
13:complement(88711760..88713470)
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AA seq
251 aa
AA seq
DB search
MNNRNRNKDLALHFIGCPGLRLKDTTHINSPSLHISIKECQDADIGNLQIIAPENSPNTD
GIDISASSHVNIHDSSIQTGDDCVAINGGVVDINVTNVFCGPGHGISIGSLGENGGHDTV
EQVLVQNCNITGTKNGLRIKTVPNGTGYAKGIRFQDINLVNVKNPIIIDQHYCPHSENPS
ELEAVQVSDVTYTNIYGSSASKLGIIFNCSEIHKCTNIVTNNIHITGGEDLAYCKNTQGE
FVDTTPNISCD
NT seq
756 nt
NT seq
+upstream
nt +downstream
nt
atgaataacaggaatagaaacaaagatttggctttacattttatcgggtgcccgggtctt
cgtctgaaagacacaacacatattaacagcccatctcttcatattagtattaaggaatgc
caagatgctgatatcggaaatcttcaaatcatagcacccgaaaacagccccaatactgat
gggattgacatcagtgcttcctcacatgttaacatccatgactctagtattcaaactggt
gacgattgtgtggctatcaatggtggcgttgttgatattaatgtgacaaatgtgttctgt
ggacctggtcatggcataagcatcggaagccttggggaaaatgggggtcatgacaccgtt
gaacaagtactagtacaaaactgtaacatcacaggaacgaaaaatggattacgaatcaag
acagtaccgaatgggaccgggtatgctaaggggatccgatttcaggacattaatcttgtt
aatgtcaaaaatccaatcataattgatcaacattactgcccccattctgaaaatccatcg
gaattagaagcagtacaagtgagcgacgtgacatatacgaatatatacggatcttcagca
tcaaagcttgggattattttcaattgcagtgagatacacaaatgcactaatatcgtgaca
aacaacatacatattactggaggtgaagatcttgcttactgcaaaaacactcaaggagaa
tttgttgataccactccaaatatcagctgtgattag
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