Helianthus annuus (common sunflower): 110903678
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Entry
110903678 CDS
T05101
Name
(RefSeq) RNA-binding protein 39 isoform X1
KO
K13091
RNA-binding protein 23/39
Organism
han
Helianthus annuus (common sunflower)
Brite
KEGG Orthology (KO) [BR:
han00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
han03041
]
110903678
Spliceosome [BR:
han03041
]
Common components
Common spliceosomal components
General mRNP proteins
110903678
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_7
Motif
Other DBs
NCBI-GeneID:
110903678
NCBI-ProteinID:
XP_022005148
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All DBs
Position
14:126641760..126654753
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AA seq
575 aa
AA seq
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MDFDEYDYLEKTVAAPANGTDSPSNPNDGGVEKTEKAYRRRDRDRDDGDDERAVEEDRKS
KKTRGDEDNGRSRRDRDRDREDRVSRSDRDRHRSSGGDRDRDREKDRDGDRDRDRRRSSR
DGEKERDRDRERSSRDREKEREREKERERSRRSRSHSRIEREREKELLREQERELELRER
ESRRLKDKKEVAEPEADPERDQRTVFAYQMPLKATEWDVYEFFSKAGKVRDVRLIMDRNS
RRSKGVGYIEFYDAMSVPMAIAMSGQLLLGQPVMVKPSEAEKNLVQSNASTGGSGGIAGP
YGAVDRKLYVGNLHFNMTELQLKQIFEAFGPVELVQLPTDLETGQCKGFGFIQFAQLEHA
KAATSLNGKLEIAGRTIKVSSVTEHVAAQDSGAKASDFDDDDGGYLALNAQSRVQLMAKL
DRSGIASGLSGSLGVGAPLVNGSGSILANGLQSTGPPAIPVPGLAQMVPVMGLEPVGKPS
ECLLLKNMFDPATETEPDFDLDIKEDVGEECSKFGRVKHIYVDKQSAGYVYLRFESVEAA
SLAQQGMHKRWFAGKMISAIFLQPYEYDAKFKGVV
NT seq
1728 nt
NT seq
+upstream
nt +downstream
nt
atggacttcgacgagtacgactacttggagaagaccgtcgccgcacctgccaacggcacc
gattctccgtcaaaccctaacgacggcggtgtagagaagaccgagaaggcttaccgccgg
agagatagggacagagacgacggcgatgacgaacgagccgtagaagaagatcggaaaagt
aagaaaaccagaggagacgaagataacggcaggagccgccgtgaccgcgaccgtgaccgt
gaggatagggtttctaggtcggaccgtgaccgtcacagaagtagcggtggtgatagggac
agggatagggaaaaggatagggatggggatagagatagggatcgccggagaagtagtaga
gacggtgagaaagaacgagacagagacagggaaaggagttcgagagacagagagaaggag
agagaaagggaaaaggagagagaaaggtctagaaggagccggagtcactcaaggatagag
cgtgaacgtgagaaggagttgcttagagaacaagaaagagaactcgaattaagggaaagg
gaaagcaggaggttaaaagataaaaaagaagtggctgaacctgaagcagatccagaaagg
gaccaaaggactgtttttgcttaccagatgccactgaaggcaacggaatgggatgtttac
gagtttttctcaaaagcaggaaaggtgcgagatgtgcgcctgatcatggataggaattca
cgaaggtcaaaaggagttgggtatattgaattttatgatgcaatgtccgtgccaatggca
attgctatgtctggtcaattacttcttggacagcctgtaatggtcaaaccctcggaggct
gaaaagaatctcgtgcaatctaatgcttcaactggtggatcaggaggtattgcaggacct
tatggtgcagttgaccggaagctttatgtgggaaatttgcatttcaacatgactgaactt
caactcaaacagatttttgaagcatttggtcctgtagagctggtgcaactgccaacggat
cttgaaaccggacaatgtaaaggtttcgggtttattcaatttgcacaactggagcatgca
aaggcagccactagtttaaatgggaagcttgagattgctgggcggacaattaaggtatct
tcagttactgaacatgttgcggcacaagactcgggagcaaaagcatcagattttgatgac
gacgatggtggatatttggctctaaatgctcaatcaagagttcagcttatggcaaagttg
gatcgaagtggtattgcatcaggtctttctggatctcttggagttggagcacctttagtt
aatggatctggttcaatcctagccaatggtttacagagtactggcccacctgcaatcccc
gttccaggtttagcccaaatggttcccgtcatgggtttagagcctgttgggaagcccagc
gaatgtcttcttctgaagaatatgtttgatcccgctaccgagaccgaacccgactttgat
ttggacataaaagaggatgttggtgaagagtgctctaaatttggaagagtgaagcatatt
tatgttgacaagcagagtgcgggttatgtatatctgcgatttgaaagtgttgaagcggca
tcactagctcaacagggaatgcataagagatggtttgctggcaaaatgatttcggcaatt
ttcttgcaaccatacgagtacgatgccaagtttaaaggtgtagtttga
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