Helianthus annuus (common sunflower): 110903754
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Entry
110903754 CDS
T05101
Name
(RefSeq) probable CCR4-associated factor 1 homolog 11
KO
K12581
CCR4-NOT transcription complex subunit 7/8
Organism
han
Helianthus annuus (common sunflower)
Pathway
han03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
han00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
110903754
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
han03019
]
110903754
Messenger RNA biogenesis [BR:
han03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
110903754
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
110903754
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CAF1
Motif
Other DBs
NCBI-GeneID:
110903754
NCBI-ProteinID:
XP_022005235
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All DBs
Position
6:30478853..30479940
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AA seq
276 aa
AA seq
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MSTCIDKTITIREVWSHNLHSEFHLIRSIIDTHPFISMDTEFPGVVYRHSPPAGKSHTHH
PPEQNYKLLKSNVDVLNIIQLGLTLSDASGNLPHDTTGQRFIWQFNFKDFDVARDPHAPE
SIELLRRQEIDFERNRVEGVDSGEFGELMMSSGLVCSDSVSWVTFHSAYDFGYLLKILTR
RQLPDGLPEFLGILRLFFGDSVYDVKHLMKFCRTGLYGGLDRVASLLEVNRVAGKCHQAG
SDSLLTLHAFQKMRDVYFVDVGLEMYAGVLYGLEAY
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atgtcaacttgtatcgataaaacaatcaccatcagagaagtatggtctcacaacttacac
tccgagttccacctcatccgatccatcatcgacacacaccccttcatctccatggacaca
gagttccccggcgtcgtttaccgccactctccacccgccggaaaatcacacacccaccac
ccgccggaacaaaactacaaacttctcaagtcaaacgtcgacgttttaaacatcatccag
ctcggtctcaccctctccgatgcctccggcaacctcccacatgacaccaccggtcaacgc
ttcatctggcagttcaattttaaagattttgatgtcgcgcgtgacccccacgcgccggag
tcgatcgagttgttgagacgtcaagagattgactttgaacggaaccgagttgagggggtt
gactcgggtgagtttggtgagttgatgatgtcatccgggttggtgtgtagtgactcggtg
agttgggtgacgtttcacagcgcgtatgattttgggtatttgttgaagattctcacgcga
cgtcagttgccggatggtttgccggagtttttggggattttgaggttgttttttggggat
agtgtgtatgatgtgaagcatttgatgaagttttgtcggaccgggttgtacggtgggttg
gaccgggtggcgagtttgttggaagtgaaccgggttgctgggaagtgtcatcaggccggt
tcggatagcttgctgacgttgcatgcttttcaaaagatgagagatgtgtattttgtggat
gttgggttggaaatgtatgccggtgtattgtatggtttagaagcttactaa
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