Helianthus annuus (common sunflower): 110903917
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Entry
110903917 CDS
T05101
Name
(RefSeq) BRCA1-associated RING domain protein 1 isoform X2
KO
K10683
BRCA1-associated RING domain protein 1
Organism
han
Helianthus annuus (common sunflower)
Pathway
han03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
han00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
110903917
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
han03019
]
110903917
04121 Ubiquitin system [BR:
han04121
]
110903917
03036 Chromosome and associated proteins [BR:
han03036
]
110903917
03400 DNA repair and recombination proteins [BR:
han03400
]
110903917
Messenger RNA biogenesis [BR:
han03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
110903917
Ubiquitin system [BR:
han04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
110903917
Chromosome and associated proteins [BR:
han03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
110903917
DNA repair and recombination proteins [BR:
han03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
110903917
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCT
BRCT_2
zf-HC5HC2H
zf-HC5HC2H_2
RTT107_BRCT_5
PHD_NSD
Motif
Other DBs
NCBI-GeneID:
110903917
NCBI-ProteinID:
XP_022005406
LinkDB
All DBs
Position
14:139311927..139321617
Genome browser
AA seq
453 aa
AA seq
DB search
MATDGGNPRASSARNSPKRHGDSGVKRQTVDGKRQKKTIGKQNDAKMETNSHPQTNGLGS
SGGQTSVVLEQSPCAFCHSSKQTEGSGPFVAYAQGKEVTGNADNFSNVIHVHLKCVSWTP
MIYFKDGLIKNLESEIIRANKLKCSSCGKKGAGLGCCRKLCQKTYHVPCAYDIPDCRWDD
DFLLLCPKHASSKFPSEEKAKSGKKDTEKGISRHLNPSKILLNYGKDLVLCGSGLSSDEK
FDLVDFASTSGAIVSIYKNNVTHVIAATDSKGACTRTYKILMAILHGKWILTMEWIKACM
EAGHLVKEEPYEVLLDNHGSCGGPKEGRLRLQNNAPRLFNNLSFYFIGDFLPTYKADLLN
LVTTAGGTVIETRDQLLLSSHEEDTKANVNEVTLVVYNADFSYNPGFEDATALKCRVLDE
AEDLAQEVGCQVVPHIWILDSIACGLQPSIPRH
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atggctaccgatggtggcaaccctagggcgagttcagcaagaaattcaccaaagagacat
ggtgattccggcgttaaacgtcaaaccgttgacggaaaaaggcaaaagaaaacgatcggt
aaacagaatgatgcgaaaatggaaacaaatagccaccctcagaccaatggtttgggttct
tctggtgggcagacatctgttgttttggagcagagtccttgtgccttctgccattcatct
aagcagacagaggggagtggaccgtttgtggcgtatgctcaagggaaagaagtaacgggg
aatgcggataacttctccaacgttatacatgttcatttaaaatgcgtaagctggacacct
atgatttattttaaagatggtcttatcaagaacttagaatcagagatcataagggcaaac
aagctaaaatgcagcagttgtggtaaaaagggagctggtcttggctgctgtaggaagtta
tgccaaaaaacttaccacgtgccttgtgcgtatgacatccctgattgcagatgggatgat
gactttttgttgctgtgtccaaagcatgcatctagcaagtttccaagtgaagagaaggca
aagtctgggaagaaagacactgagaaaggaatatctagacatctgaatcctagcaaaata
ttgttgaattatggaaaggatttggtgctatgtggttcaggtctttcttcggatgaaaag
tttgatctcgttgattttgcaagtaccagtggtgcaatagtgtcgatatacaaaaataat
gtcacccatgtgattgctgccacagattcaaaaggtgcatgcacaagaacatataaaatc
ttaatggccattttgcatggaaaatggattcttacaatggaatggataaaagcttgtatg
gaagctggacatttggtgaaagaagaaccatatgaagttcttcttgacaaccatggttct
tgtggtggccctaaagaagggagattaagacttcaaaacaatgccccaaggcttttcaac
aacttgagtttttacttcattggggactttttgccgacttataaagctgatcttctaaac
ttggttacaactgccggaggcacagttattgagacccgggatcagttattactatcaagt
catgaagaagatacaaaagcaaatgtgaatgaagttactttggttgtttacaatgctgac
ttttcatataatcctgggtttgaagatgcaactgccttgaaatgccgagtgttagatgaa
gcagaggatttagctcaagaagtcgggtgtcaggttgttccccatatatggattttggac
tcaattgcttgtggtttacaaccttctataccaaggcactaa
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