Helianthus annuus (common sunflower): 110903919
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Entry
110903919 CDS
T05101
Name
(RefSeq) BRCA1-associated RING domain protein 1 isoform X1
KO
K10683
BRCA1-associated RING domain protein 1
Organism
han
Helianthus annuus (common sunflower)
Pathway
han03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
han00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
110903919
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
han03019
]
110903919
04121 Ubiquitin system [BR:
han04121
]
110903919
03036 Chromosome and associated proteins [BR:
han03036
]
110903919
03400 DNA repair and recombination proteins [BR:
han03400
]
110903919
Messenger RNA biogenesis [BR:
han03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
110903919
Ubiquitin system [BR:
han04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
110903919
Chromosome and associated proteins [BR:
han03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
110903919
DNA repair and recombination proteins [BR:
han03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
110903919
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCT
BRCT_2
zf-HC5HC2H
zf-HC5HC2H_2
RTT107_BRCT_5
PHD_NSD
Motif
Other DBs
NCBI-GeneID:
110903919
NCBI-ProteinID:
XP_022005408
LinkDB
All DBs
Position
14:139317383..139321610
Genome browser
AA seq
437 aa
AA seq
DB search
MATDKSSAPKRHADSGVKRQTIDRKRQKKTINKRNDAKMETNSHPQTNGLGSSGGQTSVV
SEQRRCAFCHSSKQTEGSGPFVAYAQGKEVTGNVDNFSNVIHVHLTCVSWTPKIYFKNGF
IKNLESEIIRANDLKCSSCGKKGAGLGCYTVSCKKTYHVPCAYDIPGCRWDDDFLLLCPE
HASEKFPSEEKAKPGKKDTEKGKTLSSYGKNLVLCGSGLSSDEKFDLVDFASSSGAVVSI
FRDNVTHVIAATDSKGAGARTYKLLMAILHGKWILTMGWVKACMEARKLVNEEPYEVLLD
NHGSYGGPKEGRLRVQNNAPKLFNNLNFYFIGDFLSTYKADLLNLVTTAGGTVIETRDRL
LLSSHEEDTKANVNEVTLVVYNADFSYNPGFEDETALKCRVLDEAEDLAQEVGCQVVPHI
WILDSIACGLQPSIPRH
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atggctaccgataagagttcagcaccaaagagacatgctgattcgggcgtcaaacgtcaa
accattgaccgaaaaaggcaaaagaaaacgatcaataaacggaatgatgctaaaatggaa
acaaatagccacccacaaaccaatggtttgggttcttctggtgggcagacatctgttgtt
tcggagcagcgtcgttgtgccttctgccattcatctaagcagacagaggggagtggaccg
tttgtggcgtatgctcaagggaaggaagtaacaggaaatgtggataatttctccaacgtt
atacatgttcatttaacatgcgtaagctggactcctaagatttattttaagaatggattt
atcaagaacctagaatcagaaatcataagggcaaacgatctaaaatgcagcagttgtggt
aaaaaaggagctggtcttggctgctatacggtgtcgtgcaaaaaaacttaccacgtgcct
tgtgcatatgacattcctggttgcagatgggatgatgactttttgttgctgtgcccagag
catgcatctgaaaagtttccaagtgaagagaaggcaaaacctgggaagaaagacactgag
aaaggcaaaacattgtcgagttatggaaagaatttggtgttatgtggttcaggtctttct
tcagatgaaaagtttgatctcgttgattttgcaagcagcagtggtgcagtagtgtcgata
ttcagagataatgtcacccatgtgattgccgccacagattcaaaaggtgccggcgcaaga
acatataaactgttaatggccattttgcatggaaaatggattcttacaatgggatgggta
aaagcttgtatggaagctagaaagcttgtgaacgaagaaccgtatgaagttcttcttgac
aaccatggttcttatggaggccctaaagaagggagattaagagttcaaaataatgctcca
aagcttttcaacaacttgaatttctacttcattggggactttttgtcgacttataaagct
gatcttctaaacttggttacaactgccggaggcacggttatcgagacccgggatcggtta
ttactatcaagtcatgaagaagatacaaaagcaaatgtgaatgaagttactttggttgtt
tacaatgctgacttttcatataatcctgggtttgaagatgaaactgccttgaaatgccga
gtgttagatgaagcagaggatttagctcaagaagtcgggtgtcaggttgttccccatata
tggattttggattcaattgcttgtggtttacaaccttctataccaaggcactaa
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