Helianthus annuus (common sunflower): 110904068
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Entry
110904068 CDS
T05101
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 14
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
han
Helianthus annuus (common sunflower)
Pathway
han03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
han00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110904068
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
han03041
]
110904068
03009 Ribosome biogenesis [BR:
han03009
]
110904068
Enzymes [BR:
han01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
110904068
Spliceosome [BR:
han03041
]
Complex A
U1 snRNP components
U1 related factors
110904068
Complex B
110904068
Ribosome biogenesis [BR:
han03009
]
Eukaryotic type
Pre-60S particles
Helicases
110904068
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
WW
ERCC3_RAD25_C
Motif
Other DBs
NCBI-GeneID:
110904068
NCBI-ProteinID:
XP_022005563
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All DBs
Position
14:142612549..142617702
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AA seq
645 aa
AA seq
DB search
MAAAAATTTSAGPRYAPADPTLPKPWRGLVDGRTGNLYFWNPETNVTQYQRPTPPPETQS
SDNLNSANPSEQCHDDGIAGDDVRHESSGNGESKFSSDTKGHETTNGGTDDTPIETVDFG
QKETPALTPVPSVDFGQKETPALSPDAYRRRHEITVSGTNVPPPFIAFKDTGFPAELLRE
VLKAGFSAPTPIQAQSWPIALQNRDIVAVAKTGSGKTLGYLIPGFAHLKRAGKNPKMGPT
VLVLSPTRELATQIQDEAIKFGKSLKIDCTCLYGGAPKGPQLRELDHGTDIVVATPGRLN
DILEMKRVSLSQVSYLVLDEADRMLDMGFEPQIRKIVNAVPTRRQTLMYTATWPKEVRKI
AADFMVNPVQVNIGNIDELVANKSITQHVEVLTYNEKRRRLEQILGSQQPGSKIIIFCST
KKMCDVLARHLNQPFGAAAIHGDKNQSERDSVLSQFRSGKSPVLVATDVAARGLDVKDIR
VVVNYDFPTGVEDYVHRIGRTGRAGATGEAYTFFGDQDAKYASELVKVLEGANQRVPQEL
REMASRGGGMGGRSRRWNSDGDGGGSSFGGRDGGGYGGRGSGRDSDNGGGGYQSKSFHES
VSNNGGGWGAAPRSRSRSPERFDSGGPPKSFHQLMMERARAPPST
NT seq
1938 nt
NT seq
+upstream
nt +downstream
nt
atggctgctgctgctgcaactacaacctctgctggtccacgctacgcaccggcggatcct
acgcttccaaagccatggagaggcctagtagatggtagaactgggaatctctacttttgg
aatcccgaaactaatgttacccaatatcagaggcccacgcctccaccagaaacgcagtca
tcggataacttaaattcggcgaatccttctgaacaatgtcatgatgacggtattgctggt
gatgatgttaggcatgaaagcagcggcaatggtgaatcaaaattttcttccgacactaaa
ggtcatgagacaacaaatggcgggactgatgataccccgatagagacagttgactttgga
cagaaagaaactcctgctttgactcccgttccatcagttgactttggacagaaagaaact
cctgctttatccccagatgcttatcgccggcggcatgaaataactgtatctggaaccaat
gtgcctccaccttttatagcatttaaagatactgggtttcccgctgagttactcagagag
gtactcaaggctggattttctgccccaactcccatacaagcacagtcatggcccattgcg
ctccaaaatcgtgatattgtagcagttgccaaaaccggatccggaaagacattaggctac
ttgattcctggattcgcgcatcttaaacgagccgggaagaatcctaaaatgggtcccact
gttttggttttgtcacccactagagaattggctacacagatacaagatgaagcgatcaaa
tttggaaaatcattgaaaatagattgcacgtgtttatatggaggagcaccaaagggtcct
caactaagagagctggaccatggcacggacattgtggttgcgacacctggccgtttgaat
gatattcttgaaatgaaaagggtcagccttagtcaggttagttacttggtgttagacgag
gcggaccgaatgttggacatgggatttgaacctcaaataaggaaaatagttaatgcagtc
cccacacgtcgtcaaactcttatgtacactgccacctggccaaaggaggttcgaaaaatt
gcagctgattttatggttaatccagtccaagtcaatattggaaatattgatgaacttgtt
gccaataaatccattacacagcatgttgaggtattgacttacaatgagaaacgccgacgc
ttagagcagatacttggatctcaacaaccaggatctaaaataattatattttgttcaaca
aaaaaaatgtgtgatgtgctggcacgacatttgaatcagccgtttggtgctgctgcaatt
catggagataaaaatcagagtgaaagagattctgtgctgagccagtttcggtcaggcaag
tctcctgtgcttgttgcaactgatgttgccgctcgtggtctggatgtcaaagatatcagg
gtggtggtgaactatgatttcccgacgggagtggaggattatgtacaccgcattggaaga
acagggagggcaggtgctacaggagaggcgtacacgttttttggtgaccaagatgcaaag
tatgcttcagaacttgttaaagttttggaaggagcaaatcaacgtgttcctcaagaactt
cgggaaatggcttcacgtggtggtggaatgggtggaagatctaggcggtggaactcagat
ggagatggcggtggttctagctttggtggtcgtgatggtggaggatatggtggaaggggt
agcggccgtgacagtgacaatggtggtggcgggtatcaaagtaagagttttcatgaaagc
gtgtccaacaatggtggtggatggggcgcggcgccacgtagtcgtagtcgtagcccagag
aggtttgacagtggtggtccaccaaaaagttttcaccagcttatgatggagagagcccgg
gctccacctagcacctaa
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