Helianthus annuus (common sunflower): 110904200
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Entry
110904200 CDS
T05101
Name
(RefSeq) syndetin
KO
K23288
syndetin
Organism
han
Helianthus annuus (common sunflower)
Brite
KEGG Orthology (KO) [BR:
han00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
han04131
]
110904200
Membrane trafficking [BR:
han04131
]
Protein recycling
Others
EARP complex
110904200
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Vps54_N
Syndetin_C
TetR_C_30
DMP19
Motif
Other DBs
NCBI-GeneID:
110904200
NCBI-ProteinID:
XP_022005721
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Position
14:146410858..146419852
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AA seq
1069 aa
AA seq
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MQPGSISPPPFALIPLAFNHDNLTPEGFGISRFFFLGSLLLSPGGPTGGDYDGDGGMDFS
KVGEKLLSSVRSARSLGFFPSNSDRPEVPERAAAAATIARALASIPPHQRHNISSSSEEL
SSIYGSEPSNQALEELEEEFYEEEFDPVRHTLENLPHEESDLAYFEGKAALRLLQLDKVT
EILSRQVMEHHEVMVKGMDLVGELEKDLKVANVICMNGRRHLTSSRNEVSRDLVVNTSSK
RKQTLMDILQILSALRRAKDMQAELETHVNEENFFKAFQVLSEYLQLLDSLSDLLAIQEM
SRGVEIWLARTLQKLDSLLLGVCQDFKETSFLTVVDAYALIGDVSGLAEKIQSFFMQEVI
SETHAVLKSIVLEDLEASEIQSTRLTYSDLCTRIPESEFRKCLLATLSVLFKLMCSYHSI
MSFHSEYKASMGQFSNEVQKQGDETGSSKNIQQGDYQSLSDSRDDNTGASSSGSPWFHLR
NDATSVVSQTLQRGRRNLWQLTTSRVSVLLSSAAVSSTSIHQFLKIYEDLNIFILAGEAF
CGAQAADFRQKIKSICENYYLAFHKQNVHALKMVLEKESWFVMPPETIQTVSFAGLVGDG
AALISQSQTTGSHKLSDLAKTSSKQGGFSHWVKDGNPFSKHDSKECDNSPNEKVNGVSHN
GDVHRNNNGHADVSDDENEDLLADFIDEDSQLPSRIAKPKHLVNRSLSLSTEDMTAHTGS
SICVLRLMDKYARLMQKLEIINVEFFKGIRQLFGIFFHFVFESFGHLNTNPPGKANNDVN
SYRLKTALSRISQDCNQWIKSASSSEPYASQAPLNMTFSHMEITPTSPPSHTLSTSFGLK
ERCAGADTISIVARLLYKSKAHLQSVLLTNNAAVVEEFYLHLVDSVPDLTEQIHRTTAKL
LLHISGYADRIANSKWEVKELGMEHNGYVDLLLGEFKHYKTRLAHGGIRTEVQDHLIEYG
LENISEILVEGLSRVKRCSDEGRALMLLDLQVLINGLQHFVTINVKPKLQTVETFIKAYY
LPETEYVHWARAHPEYTKSQMVGLINLVATMKGWKRKNRLEVLEKIEAH
NT seq
3210 nt
NT seq
+upstream
nt +downstream
nt
atgcagcctggcagtatctcaccacctccatttgctctcattccacttgctttcaatcac
gataatttaacccctgagggtttcggtatctctaggtttttcttcttaggctcgctcctc
ttatctcccggcggacctaccggcggcgactacgacggcgacggcggtatggatttctcc
aaggtcggtgagaagcttctcagttcagtccgttccgctagatctcttggattttttcct
tctaattccgatcgtcctgaggttccagagcgtgctgcagctgcagcaactatagctcgt
gcacttgcttcaattccaccgcatcaaaggcataatatatcttcaagctctgaagagctt
agttctatatatggaagtgagccttctaatcaagcactggaagaacttgaggaagaattc
tatgaagaggagtttgatcctgttcgacacaccttagagaatcttccgcatgaagaaagt
gatcttgcatattttgaggggaaggctgctcttagattattacaactggataaagtaaca
gaaattttgtcacgccaagtgatggagcaccatgaagtaatggtgaaaggaatggatttg
gttggtgagctggagaaagacttgaaggttgcaaatgtcatttgcatgaatggacgaaga
cacctcacttcttcaaggaacgaggtttcaagagaccttgttgttaacacaagttctaaa
aggaaacaaactcttatggatattcttcaaattttatcagctctgcgccgtgcaaaggac
atgcaagcagaacttgaaacacatgtcaatgaagaaaatttctttaaggcattccaggtc
ctatctgagtatcttcaacttttggatagcttatcagaccttttggctatacaggaaatg
agtcgtggcgtagagatttggctagcaagaactctacagaagctggattcacttctgttg
ggagtgtgccaagattttaaagaaacgagctttttgactgtggtagatgcttatgcattg
atcggtgatgtttctggtcttgctgaaaagatacaaagcttctttatgcaggaggttata
tctgaaacccatgcagtgcttaagagcattgtgctagaggatctcgaagcatctgaaatt
caaagtaccagacttacatacagtgatctttgcactcgaatacctgaatccgagtttaga
aagtgtttattggcaactctttctgtcctcttcaagttaatgtgctcatatcactcaatt
atgagtttccattcagagtataaggcttcgatgggacaattttcaaatgaggtgcagaaa
caaggtgatgaaacaggttcttccaaaaacattcaacaaggtgattatcaatctctttcg
gactcaagggatgataacaccggagcttcaagcagtgggtccccatggtttcatttgaga
aacgatgccacatcagttgtttcacaaacgttacaaagaggtcgcaggaatctttggcaa
cttacaacaagccgtgtgtcagtattgctctcttctgctgcggtttcttctactagcatt
catcagtttttaaaaatttacgaagatctcaacatcttcatcttggctggtgaggccttt
tgtggggctcaagcagctgactttagacagaaaatcaaatccatttgtgaaaattattat
cttgcttttcacaagcaaaatgtacacgctctgaaaatggtattggaaaaagagagttgg
tttgtgatgcctccggagacgattcagacggtgagttttgcgggccttgttggtgatgga
gctgcattgataagtcaaagtcaaacaactgggtcccacaagttatctgacttagcaaaa
acgagcagtaaacaaggtggattctcccattgggttaaagatgggaatccattttctaaa
catgattcaaaggaatgtgataattcccctaatgaaaaagtcaacggggtatcacataat
ggtgatgtgcatcgtaataataatggtcatgctgatgtttcggatgatgaaaatgaagat
cttcttgctgactttattgacgaagatagtcaactaccgagccgtattgctaagcctaaa
catttagtaaaccgctctttatctttgagcactgaagacatgacagctcacacaggatcg
tcgatctgcgtgctaaggctgatggataaatacgcaaggctaatgcaaaagttagagata
attaacgtggagttttttaaggggatacgtcagttgtttggaatctttttccattttgtg
tttgaaagctttggtcatctgaacaccaatcctcctggaaaagcgaataatgatgttaat
agctatcgactgaaaacagctttatccagaatatcgcaagattgcaatcagtggataaag
agcgcgtcttcttcagaaccttacgcttcacaagcgccattaaacatgacattttctcat
atggaaatcacacccactagtccacccagtcatacgctcagcacatcatttggcctcaag
gaaagatgtgcaggagctgataccatctctattgttgctcgattgttgtataaatccaag
gctcatcttcaatctgtacttttgacgaataacgcagcagttgttgaagagttctatttg
catttggtggattcggtgccagatctcacagagcaaatacatagaacgactgcaaagtta
ctacttcatattagtgggtatgctgatcgaattgccaattctaaatgggaagttaaagag
cttggaatggaacataacgggtatgttgacctgttattgggggaatttaagcactacaaa
acaagactggctcacggaggcattcggaccgaggttcaagaccacttaatagaatacggt
ctcgaaaatatttctgaaattctagttgaaggactctcgagagtgaaacggtgttctgac
gagggccgagccctaatgttattggatcttcaggttttgatcaatggccttcagcatttt
gtcaccattaatgttaaaccgaaattacaaactgtcgaaacttttatcaaggcatattac
cttccggaaactgaatatgtacattgggcccgcgctcatccggaatacacaaaaagccaa
atggtggggttaattaaccttgtggctacaatgaaaggatggaaaaggaaaaacagactg
gaagtgttggaaaagatagaagcccactag
DBGET
integrated database retrieval system
