Helianthus annuus (common sunflower): 110904228
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Entry
110904228 CDS
T05101
Name
(RefSeq) nuclear pore complex protein NUP160
KO
K14303
nuclear pore complex protein Nup160
Organism
han
Helianthus annuus (common sunflower)
Pathway
han03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
han00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
110904228
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
han03019
]
110904228
03036 Chromosome and associated proteins [BR:
han03036
]
110904228
Messenger RNA biogenesis [BR:
han03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
110904228
Chromosome and associated proteins [BR:
han03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
110904228
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NUP160_helical_2
Beta-prop_Nup120_160
TPR_NUP160_120_M
HEAT_Nup120
TPR_Nup160_C
NUP160_helical
Nucleoporin_N
YejG
Motif
Other DBs
NCBI-GeneID:
110904228
NCBI-ProteinID:
XP_022005751
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All DBs
Position
3:complement(61783935..61796391)
Genome browser
AA seq
1475 aa
AA seq
DB search
MAAGSSFAGLEVPIIGSDSVRWLNVSVPSSSSTSTSTSAFAPPTEDAASSCCNIGDPPTY
FIWRINKSCPNVLEIVEFRSFAEFSRVGLRIEFASALSPYAYLCKNEVSSASRNPYMLYA
LTVSGVAYLIRLNDIASYGSCSVLPPNEVVELRITDYCDYGAITAIAATNGCLIIGGQDG
SIGCFRLGMLEFSAPGFLHELRDDSSFGRLWSLMSRRTVASVKDLVCIDIHGRKLLFVLH
ADGVLRVWDLLSCSKLLSYTINVSTSEGARFSKLWAGETTNDKSIVPLAVLLKLNSEVDG
EMISLYNLQYNLGGKANMSIEPSTMNISVEEESVIIDVKLSSNKIWILKEDGLVLHNIQG
PSESREYEQCFGLQESFIAEQLFQSSEHAADDLFWLSQSLYPSAKEQIASRVTSIFLRML
FLPDVYHNSVIRATLQDHNKHFTDSEFHSLTADAMKKEIISVIEHEGVLRSPLSLVYGWK
NFCSHYIDNWCNKNGPCGLLVDSSSGAIGLIRKSSVSLLRCLEDIELLAFGCFDELGEVA
NSKINLSSNLEQEVLFEVLRCTTSLSQQLGKGAPVLFYQSFFSHPSISPEEVVGSFLKVL
ETRCTSSTAAALRVSELGADAAWDKNVGDHKFLRKFSTDIFLSLHGLYRKAGTWDKVVDV
ILKYLNFLVPQKIEHKSDDKAVLDIRTCVTVQVTSQVAKVMFESALDILLLLSYMMKLGG
QINMLPEVVSRVQLELFPLIQEIITEWHIIHFFGTTPCEAPTMEDFSSQLSLLQIDSSAN
RRSWNDKLGKCDFTLAFILLLDHQNSFESVVSRHLPNPNSLIVPVHNFTSWIVWGRSEDE
SSCFSSRSTMLALILLKHGQYDAVEHLLTMVNQNLLKEKISSSIQDVNNEWCILLHLLGC
CLLAQAHRQAPPTSTDKKVNDAISCFFRAASLHKASMSLQNLSSESGLPHINFPDHVSSP
GAWKLHYYQWAMQIFEHYNMSAGACHFALAALEQVDEVLGLSESPITTKGRLWANVFKFT
LDLNHYHDAYCAIISNPDEESKYICLRRFIIVLYERGAIKILCDGQLPFIGLAEKVEQEL
AWKAERSDVSIKPNPYKLLYAFEMHQHNWRKAAIYMYLHSAQLKNEAALKESQLRSLALQ
ERLNCLSATINALHLVRPSSAWINPVLEGKSIQNPSKKPRITITDHDADDHLPSQKLDSC
IDIEKLENEFVLTSAEYLLSLENIRWTFEGIEKPPPNLVELLVHSNLYDMVFTVILKFFE
GSALKRELERVFIAMSLKCCPSRENSKKHVLLLTPSKDEAVDIAAHHSKGNDQWEALEQY
IEKYKCFHPRLPVIVAETLLCADRLIELPLWLVQMFKGTLNGRWGMAGSESSPASLFQLY
VDYGRYPEATNLLLHYIESVSLLRPADVIRRKKACAVWFPYTTIERLWCKLGDLINSGHM
VHQCEKLRSLLHAALLKHFKQLHVDSDDVMSSATS
NT seq
4428 nt
NT seq
+upstream
nt +downstream
nt
atggcagctgggtcgtcttttgcgggtttggaggttccgataatcggcagtgattccgtg
agatggttgaatgtctccgtcccttcttcttcttctacttccacttccacttcagccttt
gctcctcctactgaagacgctgcttcctcttgctgcaacattggcgatcctcctacttat
ttcatctggagaataaacaagagctgtccaaatgttctggagatagttgagttccgcagt
tttgcagagttttcaagggttggtttgcggatcgagtttgctagtgcactatcaccatat
gcttatttatgcaaaaacgaggtctctagtgcttctaggaacccgtacatgctttatgcg
ttgactgtttctggagttgcctatcttattagactgaatgatattgctagttatggatca
tgctctgttttgccacctaatgaggtagttgagttgcgtattacagattattgtgattat
ggagcaattacagctatagcagccaccaatggatgtcttataatagggggacaggatgga
tccattggttgttttcgacttggcatgcttgaatttagtgctccaggtttcctgcatgaa
ctacgagatgattcaagttttggtcgtttgtggagtttaatgtcgaggaggactgtcgcg
tcagtgaaagatctggtatgtatagacattcatgggagaaaacttctttttgtgcttcat
gctgatggagtattacgagtgtgggaccttttgagctgtagcaaacttctgagttatacc
attaatgtttcaacatctgaaggagctagattctcgaagttgtgggcaggcgaaactacc
aatgataaaagtatagtacctttggcggtcctgcttaagcttaattcggaagttgatgga
gagatgatctctttatataatttgcaatataatctaggagggaaggctaatatgtcaatt
gagccctcaacaatgaacatttccgttgaggaggagagtgtaatcattgatgtcaaactt
tcttcaaataaaatctggatactcaaagaagacggattggtactgcacaacattcaaggt
ccaagtgagagcagggaatacgagcaatgctttggtttacaggaatcgtttattgctgaa
caactatttcaaagttctgagcatgctgcagatgatcttttttggctttctcagtcacta
tatccctctgcaaaggagcaaattgcttctcgtgtgacctcaatcttcttgcgtatgcta
tttcttccggatgtttaccataattctgttattcgagcaacactacaagatcataacaaa
cacttcactgattctgagtttcactctttaactgctgacgcaatgaaaaaggagattatt
tccgtaattgaacacgagggtgttttgcggagtccactctcacttgtttatggctggaaa
aacttctgttcacactacattgacaattggtgtaataagaatggaccatgtgggttactt
gttgattcatcaagcggtgctattggtttaataagaaaatcatcagtttctctattgcgt
tgtttggaggatatagagcttctagctttcgggtgttttgatgaacttggggaagttgca
aactctaagatcaacttatcaagtaatctcgaacaagaagtgctttttgaggtgttgcgg
tgcaccactagtcttagccaacaactcgggaaaggtgcccctgtgttattttaccagtca
tttttcagccatccgtctatatctcctgaagaagttgtgggaagtttcttgaaggttctt
gaaacccgctgtacttcttccacagcagcagctctccgtgtatcagagctaggtgctgat
gctgcttgggataagaatgtcggtgaccacaaatttcttagaaaattttcaaccgacatt
ttcttatcacttcatgggttgtaccgaaaagctggcacttgggacaaagttgtggatgtt
atattaaaatacctcaactttttagtgcctcaaaagattgaacacaaatcagatgataaa
gcggtattggatattagaacatgcgtaacggtccaagtgacttcacaagttgctaaagtg
atgtttgaatctgcactggacatattattgctgctcagctatatgatgaagttaggtggc
cagataaatatgttacctgaagttgtttcgagggtacaactggaactatttccattgatc
caagaaattatcacggagtggcatataatacatttctttgggaccacaccttgtgaagca
cctactatggaagatttcagttctcaactctctttattacaaattgatagtagtgccaat
cgaagatcatggaatgacaagcttgggaaatgtgacttcactttggcttttattttgtta
cttgatcatcagaattcttttgaaagtgttgtttcaagacatcttccaaatcccaattct
ttaattgttcctgtacacaacttcactagctggatcgtttggggcaggagtgaagacgag
tcatcttgtttttcttctcgctcaactatgcttgctttgatcttacttaagcatgggcag
tatgatgctgttgagcaccttcttacgatggtgaaccaaaatctactaaaggagaaaata
tctagcagtattcaggatgttaacaatgaatggtgcatcctccttcaccttcttggctgt
tgtcttcttgcacaagcacaccgtcaagcaccaccaacttctaccgacaagaaagttaat
gacgctatttcctgcttttttagagctgcatctttgcacaaggcttctatgtcattgcag
aacttgtcgtccgaatctggattgccgcacattaattttcctgatcatgtctcctcacct
ggtgcttggaagcttcattattatcaatgggcaatgcaaatatttgagcactataatatg
agtgcaggtgcctgccattttgctcttgctgctcttgaacaagttgatgaagttttgggc
ctcagtgaatcgcccatcactactaaagggcgactttgggctaatgtattcaaatttacg
cttgatttgaaccattaccatgatgcatattgtgctattatttctaatcccgatgaagaa
agcaaatacatttgcttgaggcgctttatcattgttctttatgagcgtggtgccattaag
atactttgtgatggtcaattaccttttattggtttagctgagaaggtggaacaggagctt
gcttggaaggcagagcgttcagatgtatcaataaaaccgaacccttacaaattattatat
gcgtttgaaatgcatcaacataactggaggaaggctgcgatttatatgtaccttcattca
gcacaactgaaaaatgaagcggctttgaaagaatcccagctcagatcgttggctctgcaa
gaaagattaaactgcctctctgccactataaacgcactgcatcttgtccgcccatcttct
gcatggatcaatcccgtgcttgaaggaaagtctattcagaatccaagtaaaaagcctaga
attactattacagaccacgatgctgatgatcatctcccaagccagaaactggattcctgt
atagatatcgagaaacttgaaaatgagtttgttttaacttcagcagaatatttgctctca
ctggaaaatattcgatggacatttgaagggattgagaagcctccaccaaacctggttgag
ttgttggttcattcaaatctatatgatatggttttcacggtaattctgaaattttttgag
ggttcagcattgaagagggaactggaaagagtttttattgccatgtcgctgaaatgctgt
ccaagcagggaaaattctaaaaaacatgttctgcttctaacaccttcaaaagacgaggct
gttgatattgcagcacatcattctaaagggaacgaccagtgggaggcacttgagcagtac
atagaaaaatataaatgcttccatcctagattaccagtaattgttgcagaaactcttctc
tgtgctgatcggttgattgaacttcctctttggcttgttcagatgttcaagggtacactg
aacggaagatggggcatggctgggtctgaatcaagccctgcatctttgttccaactttat
gtggattatgggcgatatccagaggctactaatctgctgcttcactatatcgaatctgtt
tcattactgaggccagctgatgttattcgtagaaagaaggcatgtgcagtgtggtttcca
tacacaacaattgaacgattgtggtgtaaacttggagacttgatcaattcaggccatatg
gtccatcagtgtgaaaagctaagaagcctcttacatgcggctctgctcaagcatttcaaa
cagctacatgttgactcagatgatgtgatgtcctcagcaacctcttga
DBGET
integrated database retrieval system
