Helianthus annuus (common sunflower): 110904284
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Entry
110904284 CDS
T05101
Name
(RefSeq) exosome complex component RRP41-like
KO
K12587
exosome complex component MTR3
Organism
han
Helianthus annuus (common sunflower)
Pathway
han03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
han00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
110904284
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
han03019
]
110904284
Messenger RNA biogenesis [BR:
han03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
110904284
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Methyltransf_2
GLOD4_C
Motif
Other DBs
NCBI-GeneID:
110904284
NCBI-ProteinID:
XP_022005817
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Position
14:148306534..148309050
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AA seq
256 aa
AA seq
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MAAKAGATPATYSPSPTTNKKTRPPLFTDVDWVRPDGRDFHQCRPAFLRTGAVNAASGSA
YAEFGNTKVIVSIFGPRESKKAMMYSDIGRLNCNVSYTTFATPVRGQASENKDISSQLHK
SLEGAIMLDTFPKTTVDVFALVLESGGCDLPVVISCASLALADAGIMMYDLVAAVSVSCL
GKNLVIDPVTEEENYQGGSLMITCLPSRNEVTQLTITGEWSASKIHEAMELCLDACSKLG
KIMRSCLKESASTSQE
NT seq
771 nt
NT seq
+upstream
nt +downstream
nt
atggccgccaaagcgggagcaactccggcgacatactcaccgtctccgaccaccaataaa
aagaccagaccccctcttttcaccgacgttgattgggtccgtcctgacggtcgcgatttc
caccagtgcagacctgcatttttacgtacgggtgcggtaaatgcagcatcagggtctgct
tatgcagaatttggtaacaccaaagttattgtgtctatttttgggcccagggaaagtaag
aaagcaatgatgtacagtgatattggtcgtctgaattgtaacgttagttatacaactttt
gccactccagttcgtggtcaggcgtcagagaacaaagatatttcgtcacagctgcataag
tctttggagggtgccatcatgctcgatacatttccgaaaacaaccgtggacgtatttgca
ttagttttggaatctggaggctgtgatcttcctgttgtaatctcgtgtgctagtcttgcc
ttggcagacgcagggattatgatgtatgatttggttgctgccgtttctgtgtcttgcctt
gggaagaatcttgtgattgaccctgttacagaagaagaaaactatcaaggtggtagtttg
atgattacgtgcttaccatctcgcaatgaggttactcaactgacaataaccggtgaatgg
tccgcttcaaaaattcacgaggcaatggaattatgtctcgatgcgtgttccaagctagga
aagatcatgaggtcttgtttgaaagaatctgcctccacttcacaagaatga
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