KEGG   Helianthus annuus (common sunflower): 110904380
Entry
110904380         CDS       T05101                                 
Name
(RefSeq) replication factor C subunit 3
  KO
K10756  replication factor C subunit 3/5
Organism
han  Helianthus annuus (common sunflower)
Pathway
han03030  DNA replication
han03410  Base excision repair
han03420  Nucleotide excision repair
han03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:han00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    110904380
   03410 Base excision repair
    110904380
   03420 Nucleotide excision repair
    110904380
   03430 Mismatch repair
    110904380
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:han03032]
    110904380
   03036 Chromosome and associated proteins [BR:han03036]
    110904380
   03400 DNA repair and recombination proteins [BR:han03400]
    110904380
DNA replication proteins [BR:han03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    110904380
  DNA Replication Termination Factors
   ELG1-RFC complex
    110904380
Chromosome and associated proteins [BR:han03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    110904380
DNA repair and recombination proteins [BR:han03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     110904380
  Check point factors
   HRAD17(Rad24)-RFC complex
    110904380
SSDB
Motif
Pfam: RFC_C DNA_pol3_delta2 RCF1-5-like_lid AAA Rad17 Sigma54_activ_2 AAA_5 RuvB_N Mg_chelatase AAA_22 AAA_lid_RFC1 nSTAND3 AAA_11 ABC_tran DUF815 AAA_16 AAA_29 AAA_23 AAA_24 AAA_2 nSTAND6 SprT-like AAA_30
Other DBs
NCBI-GeneID: 110904380
NCBI-ProteinID: XP_022005930
LinkDB
Position
14:complement(152154146..152156881)
AA seq 353 aa
MLWVDKYRPKTLDKVLVHQDIALNLKKLVTEQDCPHLLFYGPPGSGKKTLIMALLRQMFG
AGAEVKVENKNWKVDAGSRTIDLELTTLSSTHHVELNPSDAGFQDRYVVQEIIKEMAKNR
PIDTKGKKGFKVLVLNEVDKLSREAQHSLRRTMEKYSASCRLILCCDSSSKVTEAVRSRC
LNIRVNAPKEDEIVKVLEFIGKKEGLQLPPGFAARIAEKSARSLRRAILSFETCRVQQYP
FTNNQVIPPMDWEEYVTEIASDIMKEQSPKRLFQVRGKLYELLVNCIPPEIILKRLLFEL
LKKLDSELKHEVCHWAAYYEHRMRLGQKAIFHIEAFVAKFMSIYKGFLIATFG
NT seq 1062 nt   +upstreamnt  +downstreamnt
atgctttgggtagacaagtacagaccaaaaaccctagacaaggttcttgttcatcaagat
atcgctctaaatctcaagaaattggtcaccgagcaagattgcccacatttattgttctat
gggccaccaggttccggcaagaaaaccctaattatggcccttctcaggcagatgtttggg
gccggtgctgaggtgaaagtagagaacaaaaactggaaagttgatgctggaagtagaact
attgatttggaacttacaacattatcaagcacccaccatgtggagctgaaccctagtgat
gccgggtttcaagatcggtacgttgttcaagaaattatcaaagaaatggcaaaaaataga
ccgattgacaccaaaggaaagaagggtttcaaagtattggtgcttaatgaggttgataaa
ctttcaagagaggcacaacattcattaagaagaacgatggagaaatacagtgcctcgtgc
cgtctgattttgtgttgtgacagctcgtcaaaggttacggaagcagtgcggtctcgttgt
cttaatatcagagtaaatgcaccaaaagaagatgagattgtgaaggttctggaattcatt
ggcaagaaagaggggctacaacttcctcctggatttgctgctcgtatagcagaaaaatca
gctcggagcttaaggagggcaatactgtcatttgagacttgtcgagtccaacagtaccct
tttaccaataatcaagtaatccccccaatggactgggaagaatatgtaactgagatagca
tccgacattatgaaagaacagagccctaaaaggttgttccaagttcgaggaaagttgtat
gagttacttgtcaattgtatccctcctgaaatcatattaaagaggttgctttttgaattg
ctcaagaaactggattctgaattgaagcatgaggtctgtcattgggctgcatattatgaa
cataggatgcgtcttggacagaaagctatttttcacattgaagcatttgtggccaagttc
atgagcatttacaaaggcttcctgattgcaacatttggttaa

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