Helianthus annuus (common sunflower): 110904425
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Entry
110904425 CDS
T05101
Name
(RefSeq) U3 small nucleolar RNA-associated protein 18 homolog
KO
K14553
U3 small nucleolar RNA-associated protein 18
Organism
han
Helianthus annuus (common sunflower)
Pathway
han03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
han00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
110904425
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
han03009
]
110904425
Ribosome biogenesis [BR:
han03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
110904425
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_EML_2
WD40_Prp19
WD40_CDC20-Fz
WD40
WDR55
WD40_WDHD1_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_RIG_2nd
EIF3I
Beta-prop_EML
WD40_MABP1-WDR62_2nd
Beta-prop_NUP159_NUP214
Beta-prop_EIPR1
NBCH_WD40
WD40_RFWD3
Motif
Other DBs
NCBI-GeneID:
110904425
NCBI-ProteinID:
XP_022005966
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Position
2:complement(156082723..156090248)
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AA seq
551 aa
AA seq
DB search
MATLISQNVVPKDKSEKPKRKAALDEPSPLDSVQEPDNLKGSDSVKPKKKKKERKESKEA
VTEQEAEMKKLENALFGSLLPVTFGNDSEEVDEPNDDSALFFTDRSANSVLSVYEDDVVK
GEIVGADNNAKRKPVWVDEEEQKVNINIAKVNRLRKMRKEEDESIITGTEYVTRLRAQHM
KLNPATEWALFDSQAKDDTSDSDSDQDNGDIDTIFQTNEDLVVKGKSKLLPGSLEYARLV
DANAQDPSHGPINSVQFHRNGQLLLTAGLDKKLRFFQIDGKRNTKIQTIFLNDCPIRKAS
FTPDGSQVILSGRRKFFYSLDLVKAKTDKIGPLVGREEKSLESFEISPDSKTIAFIGNEG
YILLVSTKTKELIGTLKMNGTARALTFANGGQQLLSTGGDGQIYHWDLRTMTCFHKGVDE
GCITGTALTTTPTGNLFAAGSDSGIVNVYNRDEFLGGNKKPVKTIENLTTKIDFMKFNHD
AQILAVCSSMKKNSMKLVHIPSFTVFSNWPPANRNLQYARCLDFSPGGGMMAMGNAAGHV
LLYKLNHYQHA
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
atggctactttaatttcacaaaatgtggttccgaaagacaaaagcgagaagcccaaaaga
aaggcagctcttgacgagccttcaccgttagattcagtccaagaacctgacaatttaaaa
ggttcggattccgtaaagccaaaaaagaaaaagaaagaacgaaaagagagcaaagaagct
gtaaccgagcaagaagccgaaatgaaaaaactcgaaaacgccttgtttggttctttatta
ccggtcaccttcggaaacgacagtgaagaagtcgatgaaccaaatgacgattctgccctt
ttctttacggatcgttccgccaacagtgtgctgtctgtttatgaagatgatgtagtaaag
ggagaaatagtcggtgcagataataatgccaaacgaaaacccgtgtgggtcgatgaagag
gaacaaaaggtcaacataaacatagcgaaagtcaaccgactgagaaagatgcggaaagaa
gaggacgagagtataatcacgggtaccgaatacgtaacacggttacgggctcaacacatg
aagctaaacccagctacagaatgggcccttttcgattcacaagcaaaagacgacacatca
gatagcgacagtgatcaagataatggggatattgataccatctttcagaccaatgaagat
cttgtcgtgaagggtaaatcaaagttattaccgggctcacttgaatacgctcgattggtt
gatgcaaacgcacaagacccgtcacacgggccgatcaattccgttcagtttcatagaaac
gggcagttgcttctcactgccgggttagacaaaaagctacggtttttccaaatcgatgga
aaacggaacacgaaaattcagacaatctttctcaatgattgtccgatcagaaaagcgtcg
ttcacacccgatggttctcaggttattttatcgggaaggagaaagtttttctacagctta
gacttggtcaaagcgaaaaccgataaaatcggtccgttagtcgggcgagaagaaaaaagt
ttagaaagttttgaaatctcaccggattcgaaaacaatcgcgtttatcggaaacgaaggt
tatatcttattggtatcaaccaaaacgaaagaacttatcggaactttaaaaatgaacggg
accgcacgtgctttgactttcgctaacggcggtcaacagctgctaagcaccggcggtgac
ggtcaaatctaccattgggatcttagaaccatgacgtgtttccacaagggtgttgacgaa
ggatgtataaccggcaccgcgttaaccacaactccaactggaaacctctttgcagcgggt
tctgatagcgggattgttaacgtatacaaccgggatgagtttctcggcggaaacaaaaaa
cccgttaaaactatcgagaatctaacgacgaaaatagatttcatgaagtttaaccatgat
gcgcagattttagcggtttgttcaagcatgaaaaagaacagtatgaagttggtgcatata
ccttcgtttacggttttttcaaactggccgccagcaaaccggaatttgcagtatgcgcgg
tgtttggatttcagtcctggtggcggtatgatggctatgggtaatgctgcgggtcatgtg
ttactttacaagttaaatcattatcaacatgcttaa
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