Helianthus annuus (common sunflower): 110904465
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Entry
110904465 CDS
T05101
Name
(RefSeq) cell division cycle protein 48 homolog
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
han
Helianthus annuus (common sunflower)
Pathway
han04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
han00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
110904465
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
han03019
]
110904465
03009 Ribosome biogenesis [BR:
han03009
]
110904465
04131 Membrane trafficking [BR:
han04131
]
110904465
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
han04147
]
110904465
Messenger RNA biogenesis [BR:
han03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
110904465
Ribosome biogenesis [BR:
han03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
110904465
Membrane trafficking [BR:
han04131
]
SNARE
SNARE associated proteins
Others
110904465
Autophagy
Aggrephagy
Other aggrephagy associated proteins
110904465
Exosome [BR:
han04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
110904465
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
CDC48_2
AAA_16
AAA_33
AAA_2
AAA_5
AAA_22
TIP49
AAA_14
NPHP3_N
RNA_helicase
AAA_17
Mg_chelatase
AAA_28
nSTAND3
AAA_18
ATPase_2
Parvo_NS1
IstB_IS21
ABC_tran
AAA_7
AAA_lid_PRS2_C
Vps4_C
NB-ARC
TsaE
DUF815
Viral_helicase1
AAA_24
Zeta_toxin
NACHT
ResIII
Molydop_binding
Zot
Motif
Other DBs
NCBI-GeneID:
110904465
NCBI-ProteinID:
XP_022006002
LinkDB
All DBs
Position
14:complement(154505545..154509057)
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AA seq
805 aa
AA seq
DB search
MSNQPESSDSKGGKKDFSTAILERKKAPNRLVVDEAINDDNSVVSMHPETMEKLQLFRGD
TILIKGKKRRDTICIALADDTCEEPKIRMNKVVRSNLRVRLGDVVSVHQCADVKYGKRVH
ILPIDDTIEGVTGSLFDAYLKPYFLEAYRPVRKGDYFLVRGGMRSVEFKVIETDPAEYCV
VAPDTEIFCEGEPVRREDEDRLDEIGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVK
PPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKMAGESESNLRKAFEEAEKN
APSIIFIDELDSIAPKREKTHGEVERRIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDPA
LRRFGRFDREIDIGVPDEVGRLEVLRIHTKNMKLADDVDLEKVAKDTHGYVGADLAALCT
EAALQCIREKMDVIDLEDESIDAEILNSMAVTNEHFQTALGTSNPSALRETVVEVPNVSW
EDIGGLENVKRELQETVQYPVEHPEKFEKFGMAPSKGVLFYGPPGCGKTLLAKAIANECQ
ANFISIKGPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQRGGSQGDAGGA
ADRVLNQLLTEMDGMSAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEESRYQI
FKSALRKSPISKDVDLRALARYTQGFSGADITEICQRACKYAIRENIEKDIEREKRRSEN
PEAMEEDMDDEVAEIKAAHFEESMKFARRSVSDADIRKYQAFAQTLQQSRGIGSEFRFSE
TSGRAAASDPFAAPAGTVDDDDLYN
NT seq
2418 nt
NT seq
+upstream
nt +downstream
nt
atgagcaatcaacctgaatcatccgactctaagggcgggaagaaggacttcagtaccgcg
attcttgagcgaaaaaaggcgccaaatagactcgttgttgatgaagctatcaacgatgat
aactctgttgtttccatgcatcctgaaaccatggaaaagcttcaacttttcagaggcgat
acaatcttgattaagggcaagaaaaggagagatacaatttgtattgcacttgctgatgac
acctgtgaagaaccaaagattaggatgaataaggttgtcaggtcaaatttgagggttagg
cttggcgatgtggtttcggtgcatcagtgtgctgatgttaagtatgggaagcgcgtccac
atccttccgatcgatgataccatcgaaggagttactgggagtctgtttgatgcttacttg
aaaccgtactttttggaagcgtaccgcccggtgagaaagggtgactactttttggtaagg
ggaggaatgagaagcgtcgagtttaaagttatcgagactgatcctgctgagtactgtgtg
gttgcacctgataccgagatattctgtgagggtgagcctgtgagaagggaagatgaggac
cggttagacgagatcggttatgatgacgttggtggtgtgcggaaacagatggcgcaaatc
cgtgagttagtggaactcccattaaggcatccgcagcttttcaagtctattggtgttaaa
ccaccaaagggtattcttctttacgggcctcctgggtctggaaagacgttgattgcccgt
gctgttgctaatgaaaccggtgctttctttttctgcattaacgggccagagatcatgtcg
aaaatggctggagagagtgagagcaatttaaggaaagcgtttgaagaagccgagaaaaac
gcaccatcgatcatctttatcgatgagcttgattcaattgcaccaaaacgggaaaaaaca
cacggtgaagttgaacgaaggatcgtttcccagttgttgactttaatggacgggctgaag
tcccgggcacatgtaattgttatgggtgcaaccaaccgccctaacagtatcgatcctgca
ttgagacggtttggtagattcgatcgtgaaattgacattggtgtgcccgatgaagttggc
cgtcttgaggttcttagaattcatactaagaacatgaagctagccgatgatgtggacttg
gagaaggttgcaaaggatacacatgggtatgtaggtgctgacctggcagctctatgcact
gaggctgcactgcagtgcatcagagagaaaatggacgtgatcgatttggaagacgagtcc
atcgatgcggagattctaaactccatggcagttacgaatgagcattttcagaccgccctc
gggaccagcaatccttccgctcttcgtgagaccgttgtcgaagttccgaacgttagctgg
gaagacatcggtggactggagaatgttaaacgagagctacaagagactgttcaatatcct
gttgaacatcccgagaaatttgagaagttcggtatggctccgtctaaaggagtcctgttc
tacggtccacccggttgcggtaaaactcttctagccaaagctattgcaaacgaatgtcag
gctaacttcatcagcatcaagggtcccgagctgcttacaatgtggttcggtgagagtgag
gccaacgttcgtgaaattttcgacaaggctcgcggctctgctccttgtgtcctctttttc
gatgaacttgattccatcgcaacccagagagggggtagtcaaggagatgctggcggtgca
gccgacagagttctgaaccaacttctgactgaaatggatggaatgtctgccaagaaaacg
gttttcatcatcggggcaaccaacaggcccgatatcatcgatccagctctgttaaggccc
ggccgtcttgatcaactgatctacattcctttaccggatgaggagtcacgttatcagatc
tttaaatccgcgttaaggaagtcaccgatttctaaagatgttgatctccgagctcttgcc
aggtacacacaaggtttcagtggtgctgacatcaccgaaatctgccagcgcgcatgcaaa
tatgccattcgtgagaacatcgagaaagatattgagagggaaaagagaagaagcgagaac
cctgaagctatggaggaagacatggacgatgaggtggcggagattaaagctgctcatttt
gaagaatcaatgaagtttgcgagaagaagtgtcagtgatgcggacataaggaaataccag
gcgtttgctcaaacactgcagcagtcgagagggattggttctgagttcagattctcggag
actagtgggcgtgctgccgctagtgacccgtttgccgccccggctggtacggttgatgat
gatgacctttataattag
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integrated database retrieval system
