Helianthus annuus (common sunflower): 110904631
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Entry
110904631 CDS
T05101
Name
(RefSeq) probable pectate lyase 5
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
han
Helianthus annuus (common sunflower)
Pathway
han00040
Pentose and glucuronate interconversions
han01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
han00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
110904631
Enzymes [BR:
han01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
110904631
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GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
110904631
NCBI-ProteinID:
XP_022006166
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Position
14:159560136..159564691
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AA seq
500 aa
AA seq
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MPPTHTTNTYILLFCLLTSLFSVIKATFNLTLPHQHPNPEAVVQEVQRRLNVSIHRRQML
DTAGGCLTGNPIDDCWRCDPNWGNKRQRLADCAIGFGKSAFGGKGGQIYVITDSSDNDVV
NPTPGTLRHAVLQTEPLWIVFKSSMVIKLKHELIVNSYKTIDGRGANVAVTGGGCITLQY
VSNVIIHNIHVYDCKPSGNVNIRSSPTHVGFRGKSDGDGISISGSRNIWIDHCSLSHCTD
GLIDAVLGSTGITISNSYFTRHNEVMLMGHDDGYMPDKGMQVTFAFNHFGKGLIQRMPRC
RHGYFHVVNNDFTEWKMYAIGGSADPTINSQGNRYIAPTNADSKEVTKRVDTDEENWSGW
NWRTDGDIMVNGAFFVPSGDGLSATYAKASSYEPKSAALVTQLTKYAGVFGGPRDDDGTA
SFTAGTITGDSASGNTGYSAGGNTGATRSSSEDDGDYFGMIFGGGTVALSPPPTTIFFIV
FVLYITTTNNGGLFSLLLLL
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atgcctcctactcacactactaacacttacattttgttgttttgcctcttaacatctctg
ttttctgtcattaaagccaccttcaacctcacactccctcaccaacatcctaaccctgaa
gctgtggttcaagaagtacaaaggagactaaatgtatccattcacagaagacaaatgctg
gacaccgccggcggctgtctcaccggaaacccaatcgacgattgctggcgttgcgacccc
aattggggcaataaacgtcaacgtcttgctgactgtgcaatcgggttcggaaaatcagca
tttggcgggaaaggaggtcagatctacgtcatcaccgactcctccgacaacgacgtcgtt
aacccaactccgggcactctccggcacgccgtcttacaaaccgaaccattatggatcgtg
tttaaatcaagcatggttattaaactcaaacacgaactaatagtcaacagttacaaaaca
atcgacggtcgtggtgccaacgtggcagttaccggcggtgggtgtattacacttcagtat
gttagtaatgttattattcataatatccacgtgtacgactgtaagccgtcggggaatgtt
aacatacggtcgagtccaacgcatgttgggtttcgagggaaatcggacggtgatgggata
tcgatatccggttcaagaaatatatggattgatcattgttcgctttctcattgtactgac
ggtttgattgacgctgtactcgggtccaccggtataactatttctaacagctattttact
cgtcataatgaggttatgcttatgggtcatgatgatgggtacatgcctgacaaagggatg
caggttacatttgcttttaatcattttgggaaaggtttgatacagagaatgccaaggtgt
agacatgggtattttcatgtggtgaataatgattttacggaatggaagatgtatgcgatt
ggtgggagtgctgacccgacgattaatagtcagggtaaccgctacattgcaccgacaaat
gctgattctaaagaggtgactaaacgagtggacacggatgaggaaaattggtcgggttgg
aactggagaacagacggtgacataatggtgaatggtgccttctttgtgccgtctggtgat
gggttgagcgcaacctacgcaaaggcgtcaagctatgagcccaagtcggcagcgctcgtg
acgcagctgaccaagtatgctggagtctttggtggaccaagggatgatgatgggactgca
tcattcactgcggggacaatcacgggagatagtgctagcgggaacacaggatatagcgct
ggcgggaacactggagcaacccgtagcagcagcgaggatgatggtgactactttgggatg
atatttggtggtggcacagttgcgttatcacctcctccaaccactatattttttattgtt
tttgttttgtacattactaccaccaacaatggtggtttattttcattattgttactacta
tag
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