Helianthus annuus (common sunflower): 110905025
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Entry
110905025 CDS
T05101
Name
(RefSeq) splicing factor-like protein 1
KO
K13095
splicing factor 1
Organism
han
Helianthus annuus (common sunflower)
Pathway
han03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
han00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110905025
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
han03041
]
110905025
Spliceosome [BR:
han03041
]
Complex A
Other components
Complex A specific factors
110905025
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SF1-HH
KH-I_KHDC4-BBP
RRM_1
KH_1
KH_12
zf-CCHC
eIF3g
Methyltrans_Mon_1st
PHD_4
KH_PNO1_2nd
RapA_C
zf-CCHC_2
Motif
Other DBs
NCBI-GeneID:
110905025
NCBI-ProteinID:
XP_022006597
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All DBs
Position
14:169753490..169757597
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AA seq
706 aa
AA seq
DB search
MDPNHNHSSPQSQTLVSPTDLQNSTTNPQQTLPSAPPIQNSLPHPTNGHTDKQHSGAEDE
TATRRRRKSRWDPPPTEDAGTVSDGSGTTAAGARKRKSRWADDAPNPMLQLPDFMKDLTA
GIVLDPKIQALNNRLLEISRKFQSGLPLDDRPEGARSPSPEPVYDNMGIRINTREYRARE
RLNKERQEIISQILKENPSFKPPADYRPPKVHKKLYIPMKEYPGYNFIGLIIGPRGNTQK
RMERETGAKIVIRGKGSVKEGRLQQKRDLKYDPSENEDLHVFVEADTQEAVDAAASMVQK
LLQPVDEVLNEHKRQQLRELAALNGTIRDEEFCRLCGEPGHRQFACPSRNSTFKSDVLCK
ICGDGGHPTIDCPVKGTAGKKMDDEYQNFLAELGGTVPESLIKSSSSTLALGPGSSSGTD
STAGAAASTAHGGLGSNVLKPSKEFDETNLYIGYLPPTLDDDTLIRLFAPFGEIVMAKVI
KDHITGLSKGYGFVKYSDVNQANTAIASMNGHLLEGRSIAVRIAGKRPPPVLPPGPPAPV
PGSYPTHPAPGLPGAPPAPYTGNPVPWGPPPPPPPTYASYPPPPPPPGSTVYPQVMSQPL
PQYGIQYPVPAPTVSSAATSLTVPSGEMQQSVQPAYSTPTYAYAPYYGAPTTAGYTSMPQ
STIDHSQIIGNVPWAPRPDVPPSAVTAETNKSSADQEYEKFLSETK
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
atggaccccaaccataaccattcgtctccacaatctcaaaccctagtttcccctaccgat
ctccaaaattcaaccaccaatccccaacaaaccctaccttctgctccaccaattcaaaat
tcacttccacatcctacaaacggccacacagacaaacaacattcaggcgctgaagacgaa
acagccacccgaagacggagaaaaagccgctgggacccgccgccgaccgaagacgccgga
acagtcagcgacggcagcggaacaaccgccgccggcgcacgcaagcggaaatctcgatgg
gcggatgatgcaccaaaccctatgttacagttaccagatttcatgaaggatttgactgca
ggtattgtgcttgatcctaaaattcaagcacttaataacaggctgcttgaaataagtaga
aagtttcaatctggtttgcctttagatgatagacctgaaggtgctagatcaccttcaccc
gaaccggtttatgataacatggggattagaattaatacgcgagagtatcgcgctagagaa
cggttgaataaagagagacaggagattatatcacagattttgaaggagaatccgtcgttt
aaacctccggcggattatcggccaccgaaggttcataagaagctttacatacctatgaag
gaataccccgggtataattttatcgggcttattattgggccgagggggaatacgcagaag
cggatggaacgagagacgggtgcgaaaattgtgattcgagggaaagggtcggtgaaggag
ggtaggttgcagcagaagagggatttgaagtatgatccttcggagaatgaggatttgcat
gtttttgtggaggcggatacgcaggaagcggttgatgcggctgcgagtatggtgcagaag
cttttgcagccggttgatgaggtgcttaatgagcataagaggcagcagttgagagaactt
gctgcgcttaatgggacaattagagatgaagagttttgtagattgtgtggtgagcctgga
caccggcagtttgcttgtccttcgcggaattcgacttttaaaagtgatgtgttgtgtaaa
atatgtggtgacggtggacatccgactatagattgtccggttaaagggaccgctggtaag
aaaatggatgatgagtatcagaactttctggcggagttaggtgggacggttccagaatct
ttgatcaagtcgagctcttcgactctggctcttggtccaggcagtagttctggaaccgat
tctactgctggagcagctgcaagtacagcacatggtggattagggtcaaatgtgttgaaa
ccgtcaaaggaattcgatgaaacaaacttgtatatcggttacttaccgcctactttggat
gacgataccttgatccgactgtttgcgccttttggtgagattgtaatggctaaagtgatt
aaagaccacatcacagggctgagtaaaggctatggttttgtgaaatattcagatgttaac
caagctaataccgctatcgctagcatgaacggtcatcttttggagggaagatcaatcgct
gtacgaattgccgggaagcgccctccaccggtgcttcctcctggtcctcctgcaccggtt
ccggggtcgtacccaacacatcctgcaccgggtcttcccggtgcaccgcctgcaccatat
actggtaatccggttccgtggggtccacctccacctccacctccgacttatgcgtcttac
ccacctccccctccgcctccaggttccaccgtgtatcctcaggtcatgagtcaaccgtta
ccgcaatatgggatacaatatcctgtacctgcgcctacagtatcttctgcagcgacttcc
ctaactgtcccttctggtgagatgcagcaaagtgttcaacctgcatattcaacgcctaca
tatgcctatgcgccgtattacggtgcacctactaccgctggttataccagtatgcctcag
tcaactattgaccattcacagattattggaaatgttccctgggccccacgtccagatgtt
ccgccatctgctgtaacagctgagacgaataaatctagtgcggatcaagaatatgagaag
ttcttgtcggagaccaaatga
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