Helianthus annuus (common sunflower): 110905037
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Entry
110905037 CDS
T05101
Name
(RefSeq) E3 ubiquitin protein ligase RIN2 isoform X1
KO
K10636
E3 ubiquitin-protein ligase AMFR [EC:
2.3.2.36
]
Organism
han
Helianthus annuus (common sunflower)
Pathway
han04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
han00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
110905037
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
han04121
]
110905037
Enzymes [BR:
han01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.36 RING-type E3 ubiquitin transferase (cysteine targeting)
110905037
Ubiquitin system [BR:
han04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
110905037
Multi subunit type E3
ERAD complex
110905037
LMBR1L-GP78-UBAC2 complex
110905037
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_SYVN1_N
zf-RING_2
CUE
zf-C3HC4
zf-rbx1
zf-RING_UBOX
zf-ANAPC11
zf-C3HC4_2
zf-RING_11
zf-C3HC4_3
zf-RING_5
E3_UbLigase_EDD
zf_RING_Vps8_fungal
zf-RING_16
FAR1_N
zf-C3HC4_4
U-box_ZFPL1
Pox_polyA_pol_N
zf-RING_Vps41
PHD
RINGv
Kazal_1
zf-HC5HC2H
zf_RING_Vps8
Motif
Other DBs
NCBI-GeneID:
110905037
NCBI-ProteinID:
XP_022006612
LinkDB
All DBs
Position
14:169898423..169906401
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AA seq
575 aa
AA seq
DB search
MGVGYLSISAACTVLSFIGLRYWTELSYVKLKSDGLMGENLLDPTVESHVMEVLLGSFTT
IALMVNFVLNVFMFIILSLKTIFFVELHASESRKLLERLVNYVFYKGTFLPLVVPPTMVH
AGFWLTWLTVLCSLKMFQALARDRLERLNASPSATPSTYFRVYCVLLLVAIVDIVWIRTC
LLIYQAISSPLFLLLFFEPLSIAFETLQAILVHGFQLLDVWLHHSAGNTTNPKISKLLDM
SAAGSLWEWKSIILRNLGFFLDLMTLLMALGHYVHIWRLHGMTFHLVDAVLFLNIRALLS
AVAKRIKGFVKLRMALKTLHGALPDATFEEIQTYDDECAICREPMAKAKKLSCNHLFHLP
CLRSWLDQGLSDNYSCPTCRKPLFVGTREGNSASRSGDVSSDEQLARQLSSTLELPNDPT
GVIPNQIQAPLEHDDWRSGSESGWLGFDGAGPSTAIRSVGLGRVQMMMRHLAAVGETYAQ
TALEDASWNLWPINASQASTSTSNNPSTSNLRHRGHAGDSIIRTAPRVSDDDLSHLLAMA
ETVREVLPHVPDELIFRDLQRTNSVSVTVNNLLQM
NT seq
1728 nt
NT seq
+upstream
nt +downstream
nt
atgggtgtgggctatttgtcaatttcagcagcctgtacggtcttgagctttataggcctc
cgctattggacagaactttcgtatgtgaaactaaagtcagatggtttgatgggtgaaaat
cttcttgaccctacggttgaaagccatgtaatggaagttttgttgggttcttttactaca
attgcgttgatggtcaattttgttctcaacgtttttatgtttatcatcttgtctctgaag
acaatattttttgttgagctacatgcatctgaatctcggaaattactggagcgattagtt
aattatgttttctacaagggaacgtttcttccgttggtagtcccaccaacaatggttcat
gcaggattttggttgacttggttgaccgtattatgctctttgaagatgtttcaagcttta
gccagggaccgccttgaacggttgaacgcctcaccttccgcaaccccctcgacgtacttc
cgtgtatattgtgttttattgctcgttgccattgtcgacatagtctggataaggacgtgt
ctactcatctaccaagcaatatcatcgcctttatttttgttattattctttgagcctctt
agtatcgctttcgaaacactacaggccattttggttcacgggtttcaattgcttgacgta
tggcttcatcactcggcaggcaacaccacaaatcccaaaatatcaaagcttttggatatg
tcagcagcaggttcattgtgggaatggaaaagcattattttaaggaatctagggtttttt
cttgatcttatgactttgttaatggctcttggtcattatgtgcatatttggcggcttcat
ggcatgacatttcatcttgtagatgcagttctttttctaaatatacgtgccttgttaagt
gcggttgcaaagcgtatcaaagggtttgttaagttaagaatggcgttgaaaacacttcat
ggggctctccctgatgcaacgttcgaagagatacagacttacgatgatgagtgtgccatt
tgtcgggaaccgatggccaaggctaagaagctctcctgtaatcatcttttccatcttcca
tgccttagatcctggttggaccaaggtctaagcgacaattattcctgccccacttgtcgt
aaacccctctttgtcggcacacgcgaaggaaattccgcatctcgttccggagatgtttca
agcgatgaacaacttgcccgccagttaagctctacactcgaactgccaaatgatcctacc
ggtgtaattccaaatcaaattcaggcccctttagaacatgacgattggaggtctggatca
gaatcgggttggttagggtttgatggggcgggcccatctacagctataagatccgtgggt
ttgggccgagtccagatgatgatgcggcatcttgcagctgtcggggaaacatatgcccaa
actgcccttgaagatgcttcttggaatctgtggcctataaacgcgtctcaggctagcacg
tctacttcgaacaatccttctaccagtaatctaagacatcgaggacacgctggcgattca
atcattaggacggccccacgtgtttcagatgatgatttgtcacatttacttgccatggct
gaaaccgttcgtgaagttcttccccatgtccccgatgaattaatatttagggatttgcag
cggacgaattcagtttctgttactgtgaataatcttctccaaatgtaa
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